RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 MTM1Q13496 603 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 PPP1R7Q15435 360 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 Q6ZNB5 142 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 ARHGAP12Q8IWW6 846 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 WFDC5Q8TCV5 224 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 C1orf74Q96LT6 269 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 LINC00597Q9H2U6 94 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 TASP1Q9H6P5 420 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 SEPT10Q9P0V9 454 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 ZNF212Q9UDV6 495 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 NEU2Q9Y3R4 380 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 KCNN4O15554 427 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 HOXC13P31276 330 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 RPL21P46778 160 aaKnown RBP14.28□□□□□ -0.12
PMS1-201ENST00000342075 SLC11A2P49281 568 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 FAXCQ5TGI0 409 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 NPAS3Q8IXF0 933 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 FGF13Q92913 245 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 NKD2Q969F2 451 aaPredicted RBP14.28□□□□□ -0.12
PMS1-201ENST00000342075 SLC39A8Q9C0K1 460 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 ADAM7Q9H2U9 754 aa14.28□□□□□ -0.12
PMS1-201ENST00000342075 A0A0D9SEW6 157 aa14.27□□□□□ -0.12
PMS1-201ENST00000342075 F5H5T6 163 aa14.27□□□□□ -0.12
PMS1-201ENST00000342075 H3BQ06 376 aaPredicted RBP14.27□□□□□ -0.12
PMS1-201ENST00000342075 ADAM15Q13444 863 aa14.27□□□□□ -0.12
PMS1-201ENST00000342075 PAFAH1B3Q15102 231 aaKnown RBP14.27□□□□□ -0.12
PMS1-201ENST00000342075 ADGRF1Q5T601 910 aa14.27□□□□□ -0.12
PMS1-201ENST00000342075 ALLCQ8N6M5 410 aa14.27□□□□□ -0.12
PMS1-201ENST00000342075 ATL2Q8NHH9 583 aa14.27□□□□□ -0.12
PMS1-201ENST00000342075 MAIP1Q8WWC4 291 aa14.27□□□□□ -0.12
PMS1-201ENST00000342075 ZFYVE19Q96K21 471 aa14.27□□□□□ -0.12
PMS1-201ENST00000342075 PWWP2AQ96N64 755 aa14.27□□□□□ -0.12
PMS1-201ENST00000342075 ZYG11BQ9C0D3 744 aa14.27□□□□□ -0.12
PMS1-201ENST00000342075 USP29Q9HBJ7 922 aa14.27□□□□□ -0.12
PMS1-201ENST00000342075 TDP1Q9NUW8 608 aa14.27□□□□□ -0.12
PMS1-201ENST00000342075 SH3BP1Q9Y3L3 701 aa14.27□□□□□ -0.12
PMS1-201ENST00000342075 IGLV3-10A0A075B6K4 115 aa14.27□□□□□ -0.13
PMS1-201ENST00000342075 KPNA1P52294 538 aaPredicted RBP14.27□□□□□ -0.13
PMS1-201ENST00000342075 FSCBQ5H9T9 825 aa14.27□□□□□ -0.13
PMS1-201ENST00000342075 TRIM68Q6AZZ1 485 aa14.27□□□□□ -0.13
PMS1-201ENST00000342075 VSIG1Q86XK7 387 aa14.27□□□□□ -0.13
PMS1-201ENST00000342075 RTL3Q8N8U3 475 aaKnown RBP14.27□□□□□ -0.13
PMS1-201ENST00000342075 CCDC110Q8TBZ0 833 aa14.27□□□□□ -0.13
PMS1-201ENST00000342075 PPM1EQ8WY54 764 aa14.27□□□□□ -0.13
PMS1-201ENST00000342075 WNT6Q9Y6F9 365 aa14.27□□□□□ -0.13
PMS1-201ENST00000342075 ZNF487B1APH4 448 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 ACVRL1P37023 503 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 HCAR3P49019 387 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 GAD2Q05329 585 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 LRRC31Q6UY01 552 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 GPR149Q86SP6 731 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 GPR161Q8N6U8 529 aaKnown RBP14.26□□□□□ -0.13
PMS1-201ENST00000342075 CCDC26Q8TAB7 109 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 PPP2R3CQ969Q6 453 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 CDCA3Q99618 268 aaPredicted RBP14.26□□□□□ -0.13
PMS1-201ENST00000342075 ASIC3Q9UHC3 531 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 DPP7Q9UHL4 492 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 NFU1Q9UMS0 254 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 TP73O15350 636 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 KRT14P02533 472 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 GLDCP23378 1020 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 OR1E1P30953 314 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 ARHGAP15Q53QZ3 475 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 FAM78AQ5JUQ0 283 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 FBXO38Q6PIJ6 1188 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 USP33Q8TEY7 942 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 HMCESQ96FZ2 354 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 ARHGAP26Q9UNA1 814 aa14.26□□□□□ -0.13
PMS1-201ENST00000342075 SEC31AO94979 1220 aaKnown RBP14.25□□□□□ -0.13
PMS1-201ENST00000342075 ITGAVP06756 1048 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 FAM153BP0C7A2 387 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 FSHRP23945 695 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 ECHS1P30084 290 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 FAM153CQ494X1 144 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 MAATS1Q7Z4T9 603 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 TTC13Q8NBP0 860 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 RSAD2Q8WXG1 361 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 ASIC4Q96FT7 647 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 ERP44Q9BS26 406 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 FAM153AQ9UHL3 310 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 TBL1XO60907 577 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 DHX34Q14147 1143 aaKnown RBP14.25□□□□□ -0.13
PMS1-201ENST00000342075 RTL10Q7L3V2 364 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 OR7D4Q8NG98 312 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 QKIQ96PU8 341 aaKnown RBP eCLIP14.25□□□□□ -0.137e-8■■■■□ 22.9
PMS1-201ENST00000342075 S1PR5Q9H228 398 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 CATSPERBQ9H7T0 1116 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 DNAJC17Q9NVM6 304 aaKnown RBP14.25□□□□□ -0.13
PMS1-201ENST00000342075 DRGXA6NNA5 263 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 J3KR12 359 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 C1RP00736 705 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 IVDP26440 423 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 PAPOLAP51003 745 aaKnown RBP14.25□□□□□ -0.13
PMS1-201ENST00000342075 NRG1Q02297 640 aaPredicted RBP14.25□□□□□ -0.13
PMS1-201ENST00000342075 GPS1Q13098 491 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 ZBTB17Q13105 803 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 P3H1Q32P28 736 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 SLC45A4Q5BKX6 768 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 DUPD1Q68J44 220 aa14.25□□□□□ -0.13
PMS1-201ENST00000342075 DRICH1Q6PGQ1 229 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms