RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 TULP3O75386 442 aa22.81■■□□□ 1.24
SDC3-202ENST00000339394 AMPD2Q01433 879 aa22.81■■□□□ 1.24
SDC3-202ENST00000339394 ZNF177Q13360 481 aaPredicted RBP22.81■■□□□ 1.24
SDC3-202ENST00000339394 ANKRD20A8PQ5CZ79 823 aa22.81■■□□□ 1.24
SDC3-202ENST00000339394 FSCBQ5H9T9 825 aa22.81■■□□□ 1.24
SDC3-202ENST00000339394 NAIF1Q69YI7 327 aaPredicted RBP22.81■■□□□ 1.24
SDC3-202ENST00000339394 WFDC5Q8TCV5 224 aa22.81■■□□□ 1.24
SDC3-202ENST00000339394 RETREG1Q9H6L5 497 aa22.81■■□□□ 1.24
SDC3-202ENST00000339394 C8orf33Q9H7E9 229 aaPredicted RBP22.81■■□□□ 1.24
SDC3-202ENST00000339394 ARHGEF4Q9NR80 690 aa22.81■■□□□ 1.24
SDC3-202ENST00000339394 NDFIP2Q9NV92 336 aa22.81■■□□□ 1.24
SDC3-202ENST00000339394 DNAJC17Q9NVM6 304 aaKnown RBP22.81■■□□□ 1.24
SDC3-202ENST00000339394 TMEM248Q9NWD8 314 aa22.81■■□□□ 1.24
SDC3-202ENST00000339394 TRIM24O15164 1050 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 GLULP15104 373 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 ERCC2P18074 760 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 CTHP32929 405 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 OPRD1P41143 372 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 CDH18Q13634 790 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 RALGPS2Q86X27 583 aaPredicted RBP22.8■■□□□ 1.24
SDC3-202ENST00000339394 VSIG1Q86XK7 387 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 FIBINQ8TAL6 211 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 FAF2Q96CS3 445 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 RBM41Q96IZ5 413 aaKnown RBP22.8■■□□□ 1.24
SDC3-202ENST00000339394 SLC2A11Q9BYW1 496 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 WNT16Q9UBV4 365 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 TBC1D30Q9Y2I9 924 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 WASH4PA8MWX3 477 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 PYGMP11217 842 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 AMPD1P23109 780 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 HLA-FP30511 346 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 OR1E1P30953 314 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 CDKN2BP42772 138 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 ASTLQ6HA08 431 aaPredicted RBP22.8■■□□□ 1.24
SDC3-202ENST00000339394 TXNDC11Q6PKC3 985 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 CCDC50Q8IVM0 306 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 CCDC117Q8IWD4 279 aaPredicted RBP22.8■■□□□ 1.24
SDC3-202ENST00000339394 RTL3Q8N8U3 475 aaKnown RBP22.8■■□□□ 1.24
SDC3-202ENST00000339394 PCDH19Q8TAB3 1148 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 WDR24Q96S15 920 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 DEC1Q9P2X7 70 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 DNAI1Q9UI46 699 aa22.8■■□□□ 1.24
SDC3-202ENST00000339394 ZNF487B1APH4 448 aa22.79■■□□□ 1.24
SDC3-202ENST00000339394 CISD3P0C7P0 127 aa22.79■■□□□ 1.24
SDC3-202ENST00000339394 EIF2DP41214 584 aaKnown RBP22.79■■□□□ 1.24
SDC3-202ENST00000339394 DGKGP49619 791 aa22.79■■□□□ 1.24
SDC3-202ENST00000339394 MESP2Q0VG99 397 aa22.79■■□□□ 1.24
SDC3-202ENST00000339394 LLGL1Q15334 1064 aa22.79■■□□□ 1.24
SDC3-202ENST00000339394 TAZQ16635 292 aa22.79■■□□□ 1.24
SDC3-202ENST00000339394 DCAF12L1Q5VU92 463 aa22.79■■□□□ 1.24
SDC3-202ENST00000339394 CXorf57Q6NSI4 855 aaKnown RBP22.79■■□□□ 1.24
SDC3-202ENST00000339394 SPOCD1Q6ZMY3 1216 aa22.79■■□□□ 1.24
SDC3-202ENST00000339394 RNF157Q96PX1 679 aa22.79■■□□□ 1.24
SDC3-202ENST00000339394 ETNK2Q9NVF9 386 aa22.79■■□□□ 1.24
SDC3-202ENST00000339394 CA14Q9ULX7 337 aa22.79■■□□□ 1.24
SDC3-202ENST00000339394 DCLK1O15075 740 aa22.78■■□□□ 1.24
SDC3-202ENST00000339394 MAPKAPK2P49137 400 aa22.78■■□□□ 1.24
SDC3-202ENST00000339394 ZNF211Q13398 564 aaPredicted RBP22.78■■□□□ 1.24
SDC3-202ENST00000339394 MLF2Q15773 248 aaPredicted RBP22.78■■□□□ 1.24
SDC3-202ENST00000339394 TFDP3Q5H9I0 405 aa22.78■■□□□ 1.24
SDC3-202ENST00000339394 C6orf118Q5T5N4 469 aa22.78■■□□□ 1.24
SDC3-202ENST00000339394 SETD3Q86TU7 594 aaPredicted RBP22.78■■□□□ 1.24
SDC3-202ENST00000339394 PQLC3Q8N755 202 aa22.78■■□□□ 1.24
SDC3-202ENST00000339394 ZNF557Q8N988 423 aaPredicted RBP22.78■■□□□ 1.24
SDC3-202ENST00000339394 OR52K2Q8NGK3 314 aa22.78■■□□□ 1.24
SDC3-202ENST00000339394 PSMB7Q99436 277 aa22.78■■□□□ 1.24
SDC3-202ENST00000339394 FBRSL1Q9HCM7 1045 aaKnown RBP22.78■■□□□ 1.24
SDC3-202ENST00000339394 ARHGEF3Q9NR81 526 aa22.78■■□□□ 1.24
SDC3-202ENST00000339394 ABCB8Q9NUT2 735 aa22.78■■□□□ 1.24
SDC3-202ENST00000339394 DONSONQ9NYP3 566 aa22.78■■□□□ 1.24
SDC3-202ENST00000339394 FBXL21Q9UKT6 434 aa22.78■■□□□ 1.24
SDC3-202ENST00000339394 SHISA7A6NL88 538 aa22.77■■□□□ 1.24
SDC3-202ENST00000339394 KCNK3O14649 394 aa22.77■■□□□ 1.24
SDC3-202ENST00000339394 KRT10P13645 584 aa22.77■■□□□ 1.24
SDC3-202ENST00000339394 CD70P32970 193 aa22.77■■□□□ 1.24
SDC3-202ENST00000339394 GALK1P51570 392 aa22.77■■□□□ 1.24
SDC3-202ENST00000339394 COPS2P61201 443 aa22.77■■□□□ 1.24
SDC3-202ENST00000339394 ZXDAP98168 799 aa22.77■■□□□ 1.24
SDC3-202ENST00000339394 LMAN2Q12907 356 aa22.77■■□□□ 1.24
SDC3-202ENST00000339394 AADACL2Q6P093 401 aa22.77■■□□□ 1.24
SDC3-202ENST00000339394 TPRG1Q6ZUI0 275 aa22.77■■□□□ 1.24
SDC3-202ENST00000339394 ZSCAN30Q86W11 494 aa22.77■■□□□ 1.24
SDC3-202ENST00000339394 PHTF2Q8N3S3 785 aa22.77■■□□□ 1.24
SDC3-202ENST00000339394 MSANTD3Q96H12 275 aa22.77■■□□□ 1.24
SDC3-202ENST00000339394 LMLNQ96KR4 655 aa22.77■■□□□ 1.24
SDC3-202ENST00000339394 PNKPQ96T60 521 aa22.77■■□□□ 1.24
SDC3-202ENST00000339394 P2RY13Q9BPV8 354 aa22.77■■□□□ 1.24
SDC3-202ENST00000339394 MAK16Q9BXY0 300 aaKnown RBP22.77■■□□□ 1.24
SDC3-202ENST00000339394 KIAA1522Q9P206 1035 aaPredicted RBP22.77■■□□□ 1.24
SDC3-202ENST00000339394 SLC27A6Q9Y2P4 619 aa22.77■■□□□ 1.24
SDC3-202ENST00000339394 KRBA1A5PL33 1030 aa22.76■■□□□ 1.23
SDC3-202ENST00000339394 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.76■■□□□ 1.23
SDC3-202ENST00000339394 ATP1A1P05023 1023 aaKnown RBP22.76■■□□□ 1.23
SDC3-202ENST00000339394 KAZNQ674X7 775 aa22.76■■□□□ 1.23
SDC3-202ENST00000339394 TMCO3Q6UWJ1 677 aa22.76■■□□□ 1.23
SDC3-202ENST00000339394 NYAP1Q6ZVC0 841 aa22.76■■□□□ 1.23
SDC3-202ENST00000339394 MFHAS1Q9Y4C4 1052 aa22.76■■□□□ 1.23
SDC3-202ENST00000339394 hCG_1818297A0A087WSY0 165 aa22.76■■□□□ 1.23
SDC3-202ENST00000339394 A0A0D9SEW6 157 aa22.76■■□□□ 1.23
SDC3-202ENST00000339394 RHOCP08134 193 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms