RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 LRIG1Q96JA1 1093 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 HSFY1Q96LI6 401 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 SLC6A18Q96N87 628 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 SERPINB11Q96P15 392 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 NT5C1BQ96P26 610 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 GSDMAQ96QA5 445 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 SERGEFQ9UGK8 458 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 PCDHB4Q9Y5E5 795 aa16.2■□□□□ 0.18
LINC01116-202ENST00000339037 TMEM131Q92545 1883 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 A0A1B0GTQ1 180 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 TRIM49BA6NDI0 452 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 GOLGA6L4A6NEF3 574 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 LRRC72A6NJI9 287 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 MID1O15344 667 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 BRD2P25440 801 aaKnown RBP16.19■□□□□ 0.18
LINC01116-202ENST00000339037 GALCP54803 685 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 NUCB2P80303 420 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 NNTQ13423 1086 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 ARID5BQ14865 1188 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 SOWAHCQ53LP3 525 aaPredicted RBP16.19■□□□□ 0.18
LINC01116-202ENST00000339037 DHRS13Q6UX07 377 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 KDM1BQ8NB78 822 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 DQX1Q8TE96 717 aaKnown RBP16.19■□□□□ 0.18
LINC01116-202ENST00000339037 FCRL2Q96LA5 508 aaPredicted RBP16.19■□□□□ 0.18
LINC01116-202ENST00000339037 MRGPRX3Q96LB0 322 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 ELF4Q99607 663 aaPredicted RBP16.19■□□□□ 0.18
LINC01116-202ENST00000339037 ZSWIM1Q9BR11 485 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 MIS12Q9H081 205 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 NUCKS1Q9H1E3 243 aaKnown RBP16.19■□□□□ 0.18
LINC01116-202ENST00000339037 METTL14Q9HCE5 456 aaKnown RBP16.19■□□□□ 0.18
LINC01116-202ENST00000339037 INTS6Q9UL03 887 aaKnown RBP16.19■□□□□ 0.18
LINC01116-202ENST00000339037 FZD4Q9ULV1 537 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 TLR6Q9Y2C9 796 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 CEP83Q9Y592 693 aa16.19■□□□□ 0.18
LINC01116-202ENST00000339037 SETXQ7Z333 2677 aaKnown RBP16.19■□□□□ 0.18
LINC01116-202ENST00000339037 A0A1W2PP55 124 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 SMC2O95347 1197 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 MOCS3O95396 460 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 FSCBQ5H9T9 825 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 MS4A13Q5J8X5 152 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 PITRM1Q5JRX3 1037 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 C9orf64Q5T6V5 341 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 MMS22LQ6ZRQ5 1243 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 MMAAQ8IVH4 418 aaKnown RBP16.18■□□□□ 0.18
LINC01116-202ENST00000339037 CFAP52Q8N1V2 620 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 OR2T34Q8NGX1 318 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 SPATA20Q8TB22 786 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 FAM149B1Q96BN6 582 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 MYEOVQ96EZ4 313 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 OMDQ99983 421 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 NEUROG2Q9H2A3 272 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 AASDHPPTQ9NRN7 309 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 ADAMTS1Q9UHI8 967 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 ERVW-1Q9UQF0 538 aa16.18■□□□□ 0.18
LINC01116-202ENST00000339037 EDDM13A0A1B0GTR0 161 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 TARSL2A2RTX5 802 aaKnown RBP16.17■□□□□ 0.18
LINC01116-202ENST00000339037 TTC34A8MYJ7 566 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 RNF225M0QZC1 329 aaPredicted RBP16.17■□□□□ 0.18
LINC01116-202ENST00000339037 PMM2O15305 246 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 SART1O43290 800 aaKnown RBP16.17■□□□□ 0.18
LINC01116-202ENST00000339037 LUC7L3O95232 432 aaKnown RBP16.17■□□□□ 0.18
LINC01116-202ENST00000339037 MOCS2O96007 188 aaPredicted RBP16.17■□□□□ 0.18
LINC01116-202ENST00000339037 CALCAP01258 141 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 FYNP06241 537 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 SRPRAP08240 638 aaKnown RBP16.17■□□□□ 0.18
LINC01116-202ENST00000339037 ABCB4P21439 1286 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 SLC8A1P32418 973 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 CTSOP43234 321 aaPredicted RBP16.17■□□□□ 0.18
LINC01116-202ENST00000339037 PSMD8P48556 350 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 ECT2LQ008S8 904 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 CETN1Q12798 172 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 KCNJ12Q14500 433 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 DCAF6Q58WW2 860 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 PRAMEF14Q5SWL7 426 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 RNF219Q5W0B1 726 aaPredicted RBP16.17■□□□□ 0.18
LINC01116-202ENST00000339037 TMPRSS12Q86WS5 348 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 GATAD2AQ86YP4 633 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 ADAM32Q8TC27 787 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 KAT5Q92993 513 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 SMARCE1Q969G3 411 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 SLC39A13Q96H72 371 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 GTPBP4Q9BZE4 634 aaKnown RBP16.17■□□□□ 0.18
LINC01116-202ENST00000339037 EBF2Q9HAK2 575 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 ST7Q9NRC1 585 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 NAALADL1Q9UQQ1 740 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 PCDHGA1Q9Y5H4 931 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 CFAP46Q8IYW2 2715 aa16.17■□□□□ 0.18
LINC01116-202ENST00000339037 FLNBO75369 2602 aaKnown RBP16.16■□□□□ 0.18
LINC01116-202ENST00000339037 A0A087WV48 116 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 E9PAM4 449 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 PSMA7O14818 248 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 ADH1BP00325 375 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 APOEP02649 317 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 WNT1P04628 370 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 ITGAVP06756 1048 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 CD38P28907 300 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 CCR5P51681 352 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 GCNT1Q02742 428 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 STIM1Q13586 685 aa16.16■□□□□ 0.18
LINC01116-202ENST00000339037 CCDC40Q4G0X9 1142 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms