RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 PAGE2BQ5JRK9 111 aa13.33□□□□□ -0.27
HLCS-201ENST00000336648 TSHZ1Q6ZSZ6 1077 aa13.33□□□□□ -0.27
HLCS-201ENST00000336648 EXOC3L1Q86VI1 746 aa13.33□□□□□ -0.27
HLCS-201ENST00000336648 FAM131BQ86XD5 332 aa13.33□□□□□ -0.27
HLCS-201ENST00000336648 CLEC10AQ8IUN9 316 aa13.33□□□□□ -0.27
HLCS-201ENST00000336648 UBE2E3Q969T4 207 aa13.33□□□□□ -0.27
HLCS-201ENST00000336648 CBWD1Q9BRT8 395 aa13.33□□□□□ -0.27
HLCS-201ENST00000336648 BCLAF3A2AJT9 711 aaKnown RBP13.33□□□□□ -0.28
HLCS-201ENST00000336648 FCHO1O14526 889 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 ATP6V1C1P21283 382 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 MTM1Q13496 603 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 PLCL1Q15111 1095 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 FBXO42Q6P3S6 717 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 ZNF605Q86T29 641 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 CLVS1Q8IUQ0 354 aaPredicted RBP13.33□□□□□ -0.28
HLCS-201ENST00000336648 KLHL1Q9NR64 748 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 KCNK4Q9NYG8 393 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 KLK14Q9P0G3 267 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 BTBD3Q9Y2F9 522 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 CRYL1Q9Y2S2 319 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 RNF17Q9BXT8 1623 aaKnown RBP13.33□□□□□ -0.28
HLCS-201ENST00000336648 CCNT2O60583 730 aaKnown RBP13.33□□□□□ -0.28
HLCS-201ENST00000336648 CYP2C18P33260 490 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 RFX3P48380 749 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 RFX5P48382 616 aaPredicted RBP13.33□□□□□ -0.28
HLCS-201ENST00000336648 STARD3Q14849 445 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 FIG4Q92562 907 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 FKBP14Q9NWM8 211 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 UXTQ9UBK9 157 aaPredicted RBP13.33□□□□□ -0.28
HLCS-201ENST00000336648 ZNF24P17028 368 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 CCNA2P20248 432 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 HK2P52789 917 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 CYP2A13Q16696 494 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 TMEM63BQ5T3F8 832 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 IRAK1BP1Q5VVH5 260 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 HLA-DQA1Q5Y7H0 255 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 TXNRD3Q86VQ6 643 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 FAM126BQ8IXS8 530 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 TAS1R2Q8TE23 839 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 CENPIQ92674 756 aaPredicted RBP13.33□□□□□ -0.28
HLCS-201ENST00000336648 SYT15Q9BQS2 421 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 AGO4Q9HCK5 861 aaKnown RBP13.33□□□□□ -0.28
HLCS-201ENST00000336648 DDX18Q9NVP1 670 aaKnown RBP13.33□□□□□ -0.28
HLCS-201ENST00000336648 GSTK1Q9Y2Q3 226 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 UBE2QL1A1L167 161 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 SMIM22K7EJ46 135 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 STAU1O95793 577 aaKnown RBP13.33□□□□□ -0.28
HLCS-201ENST00000336648 GPR15P49685 360 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 CDK16Q00536 496 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 MKRN4PQ13434 485 aaPredicted RBP13.33□□□□□ -0.28
HLCS-201ENST00000336648 FAM187BQ17R55 369 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 ZPBP2Q6X784 338 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 USP7Q93009 1102 aa13.33□□□□□ -0.28
HLCS-201ENST00000336648 WWP2O00308 870 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 IGSF6O95976 241 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 CCNIQ14094 377 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 RGS21Q2M5E4 152 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 CBWD3Q5JTY5 395 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 CBWD5Q5RIA9 395 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 PGBD2Q6P3X8 592 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 ADHFE1Q8IWW8 467 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 FNDC5Q8NAU1 212 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 PROX1Q92786 737 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 SMARCD1Q96GM5 515 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 ZDHHC15Q96MV8 337 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 FRMD6Q96NE9 622 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 ENTPD7Q9NQZ7 604 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 GPATCH2LQ9NWQ4 482 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 THG1LQ9NWX6 298 aaKnown RBP13.32□□□□□ -0.28
HLCS-201ENST00000336648 SH3BP4Q9P0V3 963 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 ING4Q9UNL4 249 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 SETBP1Q9Y6X0 1596 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 NFICP08651 508 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 BACE1P56817 501 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 TBX4P57082 545 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 INO80DQ53TQ3 878 aaPredicted RBP13.32□□□□□ -0.28
HLCS-201ENST00000336648 RUNDC3AQ59EK9 446 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 MILR1Q7Z6M3 343 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 NT5DC3Q86UY8 548 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 CCDC36Q8IYA8 594 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 OR6Y1Q8NGX8 325 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 B3GALT6Q96L58 329 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 BCL2L14Q9BZR8 327 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 TMX2Q9Y320 296 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 PCP4L1A6NKN8 68 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 TBC1D12O60347 775 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 CD44P16070 742 aaKnown RBP13.32□□□□□ -0.28
HLCS-201ENST00000336648 PAX3P23760 479 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 NEK3P51956 506 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 HIRAP54198 1017 aaPredicted RBP13.32□□□□□ -0.28
HLCS-201ENST00000336648 NME5P56597 212 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 RRP1BQ14684 758 aaKnown RBP13.32□□□□□ -0.28
HLCS-201ENST00000336648 TTC27Q6P3X3 843 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 PTAR1Q7Z6K3 402 aaPredicted RBP13.32□□□□□ -0.28
HLCS-201ENST00000336648 ZDHHC13Q8IUH4 622 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 TRPC4APQ8TEL6 797 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 SKA1Q96BD8 255 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 C1QTNF7Q9BXJ2 289 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 TMEM39BQ9GZU3 492 aa13.32□□□□□ -0.28
HLCS-201ENST00000336648 SPATA31A6Q5VVP1 1343 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms