RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 PNMA8BQ9ULN7 279 aaPredicted RBP13.28□□□□□ -0.28
VSTM4-202ENST00000332853 PCDHA2Q9Y5H9 948 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 CICQ96RK0 1608 aaPredicted RBP13.28□□□□□ -0.28
VSTM4-202ENST00000332853 CNTNAP1P78357 1384 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 MRPS5P82675 430 aaKnown RBP13.28□□□□□ -0.28
VSTM4-202ENST00000332853 STX5Q13190 355 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 AGKQ53H12 422 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 DEFB107AQ8IZN7 70 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 DAW1Q8N136 415 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 EIF1ADQ8N9N8 165 aaKnown RBP13.28□□□□□ -0.28
VSTM4-202ENST00000332853 EFCAB1Q9HAE3 211 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 ZNF214Q9UL59 606 aaPredicted RBP13.28□□□□□ -0.28
VSTM4-202ENST00000332853 LZTS3O60299 673 aaPredicted RBP13.27□□□□□ -0.28
VSTM4-202ENST00000332853 SMPD1P17405 629 aa13.27□□□□□ -0.28
VSTM4-202ENST00000332853 ITGALP20701 1170 aa13.27□□□□□ -0.28
VSTM4-202ENST00000332853 KRT72Q14CN4 511 aa13.27□□□□□ -0.28
VSTM4-202ENST00000332853 CPNE8Q86YQ8 564 aa13.27□□□□□ -0.28
VSTM4-202ENST00000332853 NAF1Q96HR8 494 aaKnown RBP13.27□□□□□ -0.28
VSTM4-202ENST00000332853 POMKQ9H5K3 350 aa13.27□□□□□ -0.28
VSTM4-202ENST00000332853 ATP4AP20648 1035 aa13.27□□□□□ -0.28
VSTM4-202ENST00000332853 OTOAQ7RTW8 1153 aa13.27□□□□□ -0.28
VSTM4-202ENST00000332853 EXOC3L1Q86VI1 746 aa13.27□□□□□ -0.28
VSTM4-202ENST00000332853 SIAH1Q8IUQ4 282 aa13.27□□□□□ -0.28
VSTM4-202ENST00000332853 LRRC57Q8N9N7 239 aa13.27□□□□□ -0.28
VSTM4-202ENST00000332853 THAP1Q9NVV9 213 aa13.27□□□□□ -0.28
VSTM4-202ENST00000332853 IL1RAPL1Q9NZN1 696 aa13.27□□□□□ -0.28
VSTM4-202ENST00000332853 A0A1W2PPM1 405 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 CD48P09326 243 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 MAXP61244 160 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 SP2Q02086 613 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 BBS12Q6ZW61 710 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 TAGAPQ8N103 731 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 ACOX2Q99424 681 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 TCF7L2Q9NQB0 619 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 C5orf58C9J3I9 102 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 PAPSS1O43252 624 aaPredicted RBP13.27□□□□□ -0.29
VSTM4-202ENST00000332853 TOMM70O94826 608 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 RAG1P15918 1043 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 FLT3LGP49771 235 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 SPIRE1Q08AE8 756 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 PTK2BQ14289 1009 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 NOMO2Q5JPE7 1267 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 BNC2Q6ZN30 1099 aaPredicted RBP13.27□□□□□ -0.29
VSTM4-202ENST00000332853 DIS3LQ8TF46 1054 aaKnown RBP13.27□□□□□ -0.29
VSTM4-202ENST00000332853 SYT17Q9BSW7 474 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 DUSP16Q9BY84 665 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 SPASTQ9UBP0 616 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 ICAM3P32942 547 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 PGS1Q32NB8 556 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 LZTR1Q8N653 840 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 ZNF555Q8NEP9 628 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 CKAP2Q8WWK9 683 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 PPP2R3CQ969Q6 453 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 MBOAT7Q96N66 472 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 DLGAP2Q9P1A6 1054 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 SETD1AO15047 1707 aaKnown RBP13.27□□□□□ -0.29
VSTM4-202ENST00000332853 ATRNL1Q5VV63 1379 aa13.27□□□□□ -0.29
VSTM4-202ENST00000332853 SMIM28A0A1B0GU29 152 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 XPO1O14980 1071 aaKnown RBP13.26□□□□□ -0.29
VSTM4-202ENST00000332853 CILPO75339 1184 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 SP3Q02447 781 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 TAF5Q15542 800 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 OLFM3Q96PB7 478 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 CDK5RAP1Q96SZ6 601 aaKnown RBP13.26□□□□□ -0.29
VSTM4-202ENST00000332853 LPIN3Q9BQK8 851 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 FBXO6Q9NRD1 293 aaPredicted RBP13.26□□□□□ -0.29
VSTM4-202ENST00000332853 FAM95CA0A1B0GW59 222 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 CCNT2O60583 730 aaKnown RBP13.26□□□□□ -0.29
VSTM4-202ENST00000332853 OR4Q2P0C623 313 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 CCNB1P14635 433 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 TTC27Q6P3X3 843 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 UNC5AQ6ZN44 842 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 ITIH5Q86UX2 942 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 SPATA6LQ8N4H0 392 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 RNF148Q8N7C7 305 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 LZICQ8WZA0 190 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 TFAP2BQ92481 460 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 PRCCQ92733 491 aaPredicted RBP13.26□□□□□ -0.29
VSTM4-202ENST00000332853 ZNF670Q9BS34 389 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 NMRAL1Q9HBL8 299 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 SYTL2Q9HCH5 934 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 PCDH18Q9HCL0 1135 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 EIF3LQ9Y262 564 aaKnown RBP13.26□□□□□ -0.29
VSTM4-202ENST00000332853 A0A0G2JLL6 359 aaPredicted RBP13.26□□□□□ -0.29
VSTM4-202ENST00000332853 FAM237BA0A1B0GVD1 139 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 DARSP14868 501 aaKnown RBP13.26□□□□□ -0.29
VSTM4-202ENST00000332853 MATKP42679 507 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 DSG1Q02413 1049 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 TBL3Q12788 808 aaKnown RBP13.26□□□□□ -0.29
VSTM4-202ENST00000332853 PLEKHA7Q6IQ23 1121 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 EFL1Q7Z2Z2 1120 aaKnown RBP13.26□□□□□ -0.29
VSTM4-202ENST00000332853 POLNQ7Z5Q5 900 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 PRRT2Q7Z6L0 340 aaPredicted RBP13.26□□□□□ -0.29
VSTM4-202ENST00000332853 FAM35AQ86V20 835 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 FAR2Q96K12 515 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 MARK4Q96L34 752 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 DMAC2Q9NW81 257 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 SYBUQ9NX95 663 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 MPP6Q9NZW5 540 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 MYH13Q9UKX3 1938 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms