RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 LMAN2Q12907 356 aa26.72■■□□□ 1.87
SMDT1-201ENST00000331479 DPYSL2Q16555 572 aa26.72■■□□□ 1.87
SMDT1-201ENST00000331479 CXorf57Q6NSI4 855 aaKnown RBP26.72■■□□□ 1.87
SMDT1-201ENST00000331479 DAAM2Q86T65 1068 aa26.72■■□□□ 1.87
SMDT1-201ENST00000331479 SUGP1Q8IWZ8 645 aaKnown RBP26.72■■□□□ 1.87
SMDT1-201ENST00000331479 CCDC105Q8IYK2 499 aa26.72■■□□□ 1.87
SMDT1-201ENST00000331479 OR52K2Q8NGK3 314 aa26.72■■□□□ 1.87
SMDT1-201ENST00000331479 SIT1Q9Y3P8 196 aa26.72■■□□□ 1.87
SMDT1-201ENST00000331479 CUL9Q8IWT3 2517 aa26.72■■□□□ 1.87
SMDT1-201ENST00000331479 GRID2IPA4D2P6 1211 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 TBC1D3BA6NDS4 549 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 PRRT4C9JH25 899 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 SPOPO43791 374 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 EPHB2P29323 1055 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 HOXC13P31276 330 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 NLRP14Q86W24 1093 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 CALR3Q96L12 384 aaKnown RBP26.71■■□□□ 1.87
SMDT1-201ENST00000331479 TSGA10Q9BZW7 698 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 LMAN1LQ9HAT1 526 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 LZTFL1Q9NQ48 299 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 KLHL11Q9NVR0 708 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 GUCA1BQ9UMX6 200 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.71■■□□□ 1.87
SMDT1-201ENST00000331479 DCNP07585 359 aaKnown RBP26.71■■□□□ 1.87
SMDT1-201ENST00000331479 GOT1P17174 413 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 ZNF177Q13360 481 aaPredicted RBP26.71■■□□□ 1.87
SMDT1-201ENST00000331479 TMEM215Q68D42 235 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 BMP8AQ7Z5Y6 402 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 KIAA0907Q7Z7F0 614 aaPredicted RBP26.71■■□□□ 1.87
SMDT1-201ENST00000331479 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.71■■□□□ 1.87
SMDT1-201ENST00000331479 LRRC57Q8N9N7 239 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 OSBPL6Q9BZF3 934 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 NDFIP2Q9NV92 336 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 CWC15Q9P013 229 aaKnown RBP26.71■■□□□ 1.87
SMDT1-201ENST00000331479 GGA2Q9UJY4 613 aa26.71■■□□□ 1.87
SMDT1-201ENST00000331479 KRT86O43790 486 aa26.7■■□□□ 1.86
SMDT1-201ENST00000331479 KRT7P08729 469 aa26.7■■□□□ 1.86
SMDT1-201ENST00000331479 CD48P09326 243 aa26.7■■□□□ 1.86
SMDT1-201ENST00000331479 TNNT1P13805 278 aa26.7■■□□□ 1.86
SMDT1-201ENST00000331479 RHOQP17081 205 aa26.7■■□□□ 1.86
SMDT1-201ENST00000331479 NUMBP49757 651 aa26.7■■□□□ 1.86
SMDT1-201ENST00000331479 ARSEP51690 589 aa26.7■■□□□ 1.86
SMDT1-201ENST00000331479 TPI1P60174 286 aa26.7■■□□□ 1.86
SMDT1-201ENST00000331479 PREPLQ4J6C6 727 aaPredicted RBP26.7■■□□□ 1.86
SMDT1-201ENST00000331479 ZNF662Q6ZS27 426 aa26.7■■□□□ 1.86
SMDT1-201ENST00000331479 CCDC117Q8IWD4 279 aaPredicted RBP26.7■■□□□ 1.86
SMDT1-201ENST00000331479 PCDH18Q9HCL0 1135 aa26.7■■□□□ 1.86
SMDT1-201ENST00000331479 TBC1D30Q9Y2I9 924 aa26.7■■□□□ 1.86
SMDT1-201ENST00000331479 CAPN6Q9Y6Q1 641 aa26.7■■□□□ 1.86
SMDT1-201ENST00000331479 EEF2KO00418 725 aaKnown RBP26.69■■□□□ 1.86
SMDT1-201ENST00000331479 PABPC1P11940 636 aaKnown RBP26.69■■□□□ 1.86
SMDT1-201ENST00000331479 AOC1P19801 751 aa26.69■■□□□ 1.86
SMDT1-201ENST00000331479 EMC10Q5UCC4 262 aa26.69■■□□□ 1.86
SMDT1-201ENST00000331479 POLNQ7Z5Q5 900 aa26.69■■□□□ 1.86
SMDT1-201ENST00000331479 ANKS1BQ7Z6G8 1248 aa26.69■■□□□ 1.86
SMDT1-201ENST00000331479 ADIPOR2Q86V24 386 aa26.69■■□□□ 1.86
SMDT1-201ENST00000331479 ZNF557Q8N988 423 aaPredicted RBP26.69■■□□□ 1.86
SMDT1-201ENST00000331479 TMEM248Q9NWD8 314 aa26.69■■□□□ 1.86
SMDT1-201ENST00000331479 KIAA1522Q9P206 1035 aaPredicted RBP26.69■■□□□ 1.86
SMDT1-201ENST00000331479 INTS6Q9UL03 887 aaKnown RBP26.69■■□□□ 1.86
SMDT1-201ENST00000331479 HCN2Q9UL51 889 aa26.69■■□□□ 1.86
SMDT1-201ENST00000331479 PALMO75781 387 aa26.68■■□□□ 1.86
SMDT1-201ENST00000331479 CHRM1P11229 460 aaPredicted RBP26.68■■□□□ 1.86
SMDT1-201ENST00000331479 MZF1P28698 734 aaPredicted RBP26.68■■□□□ 1.86
SMDT1-201ENST00000331479 OR1E1P30953 314 aa26.68■■□□□ 1.86
SMDT1-201ENST00000331479 CSKP41240 450 aa26.68■■□□□ 1.86
SMDT1-201ENST00000331479 TNFRSF4P43489 277 aa26.68■■□□□ 1.86
SMDT1-201ENST00000331479 CDH6P55285 790 aa26.68■■□□□ 1.86
SMDT1-201ENST00000331479 SEC13P55735 322 aa26.68■■□□□ 1.86
SMDT1-201ENST00000331479 IFI16Q16666 785 aaKnown RBP26.68■■□□□ 1.86
SMDT1-201ENST00000331479 Q6ZS52 159 aa26.68■■□□□ 1.86
SMDT1-201ENST00000331479 RFX8Q6ZV50 586 aa26.68■■□□□ 1.86
SMDT1-201ENST00000331479 RNF10Q8N5U6 811 aaKnown RBP26.68■■□□□ 1.86
SMDT1-201ENST00000331479 FAM71BQ8TC56 605 aa26.68■■□□□ 1.86
SMDT1-201ENST00000331479 KIAA1524Q8TCG1 905 aa26.68■■□□□ 1.86
SMDT1-201ENST00000331479 CLDN23Q96B33 292 aa26.68■■□□□ 1.86
SMDT1-201ENST00000331479 RNF40O75150 1001 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 CLCN5P51795 746 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 FUT11Q495W5 492 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 DGKKQ5KSL6 1271 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 LRRC38Q5VT99 294 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 RHOT1Q8IXI2 618 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 APCDD1Q8J025 514 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 FBXL6Q8N531 539 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 RAPGEF5Q92565 580 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 ZDHHC4Q9NPG8 344 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 DLGAP2Q9P1A6 1054 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 DNAI1Q9UI46 699 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 ATG2BQ96BY7 2078 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 IL4RP24394 825 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 HTR7P34969 479 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 MMRN1Q13201 1228 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 LRRC32Q14392 662 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 KRT81Q14533 505 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 AHI1Q8N157 1196 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 RTL3Q8N8U3 475 aaKnown RBP26.67■■□□□ 1.86
SMDT1-201ENST00000331479 KCTD6Q8NC69 237 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 SORCS1Q8WY21 1168 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 TSC1Q92574 1164 aa26.67■■□□□ 1.86
SMDT1-201ENST00000331479 ALG14Q96F25 216 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms