RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 SLC9A4Q6AI14 798 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 MTSS1LQ765P7 747 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 NLRP14Q86W24 1093 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 FAM131BQ86XD5 332 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 SLC13A5Q86YT5 568 aaPredicted RBP9.78□□□□□ -0.84
C11orf54-201ENST00000331239 ZNF473Q8WTR7 871 aaKnown RBP9.78□□□□□ -0.84
C11orf54-201ENST00000331239 ADAM33Q9BZ11 813 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 TXLNGYQ9BZA5 131 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 OSBPL8Q9BZF1 889 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 ZDHHC18Q9NUE0 388 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.78□□□□□ -0.84
C11orf54-201ENST00000331239 MTMR10Q9NXD2 777 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 OR12D3Q9UGF7 316 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 PCSK1NQ9UHG2 260 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 CHD9Q3L8U1 2897 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 hCG_1818297A0A087WSY0 165 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 CKMP06732 381 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 TFE3P19532 575 aaPredicted RBP9.78□□□□□ -0.84
C11orf54-201ENST00000331239 SERPINB6P35237 376 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 CCR2P41597 374 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 MAPKAPK2P49137 400 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 CDH6P55285 790 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 EIF3BP55884 814 aaKnown RBP9.78□□□□□ -0.84
C11orf54-201ENST00000331239 IFFO1Q0D2I5 559 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 XRCC4Q13426 336 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 TXNDC8Q6A555 127 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 TMC5Q6UXY8 1006 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 CCDC185Q8N715 623 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 ARL14EPQ8N8R7 260 aaPredicted RBP9.78□□□□□ -0.84
C11orf54-201ENST00000331239 MAB21L3Q8N8X9 362 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 TBC1D31Q96DN5 1066 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 RNF157Q96PX1 679 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 CDX2Q99626 313 aaPredicted RBP9.78□□□□□ -0.84
C11orf54-201ENST00000331239 HCFC1R1Q9NWW0 138 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 THG1LQ9NWX6 298 aaKnown RBP9.78□□□□□ -0.84
C11orf54-201ENST00000331239 CLDND1Q9NY35 253 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 ATP8A1Q9Y2Q0 1164 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 SH3BP1Q9Y3L3 701 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 CPQQ9Y646 472 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 A0A0C4DFX4 3053 aa9.78□□□□□ -0.84
C11orf54-201ENST00000331239 DOCK4Q8N1I0 1966 aa9.77□□□□□ -0.84
C11orf54-201ENST00000331239 MYO7AQ13402 2215 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 LRRD1A4D1F6 860 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 EEF2KO00418 725 aaKnown RBP9.77□□□□□ -0.85
C11orf54-201ENST00000331239 GREM1O60565 184 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 ECI2O75521 394 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 KIAA0754O94854 1291 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 PYGMP11217 842 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 RHOQP17081 205 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 ETFBP38117 255 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 DRG2P55039 364 aaKnown RBP9.77□□□□□ -0.85
C11orf54-201ENST00000331239 PPP2R2AP63151 447 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 PITX1P78337 314 aaPredicted RBP9.77□□□□□ -0.85
C11orf54-201ENST00000331239 LMNB2Q03252 620 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 DPYSQ14117 519 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 PAFAH1B3Q15102 231 aaKnown RBP9.77□□□□□ -0.85
C11orf54-201ENST00000331239 PDGFRLQ15198 375 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 E2F5Q15329 346 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 ZNF77Q15935 545 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 ANKRD20A8PQ5CZ79 823 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 AADACL2Q6P093 401 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 MICALCLQ6ZW33 695 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 HOOK3Q86VS8 718 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 NPAS3Q8IXF0 933 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 ZNF683Q8IZ20 524 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 PRELID2Q8N945 189 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 C12orf50Q8NA57 414 aaPredicted RBP9.77□□□□□ -0.85
C11orf54-201ENST00000331239 DEPDC1BQ8WUY9 529 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 ELSPBP1Q96BH3 223 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 KCTD15Q96SI1 283 aaPredicted RBP9.77□□□□□ -0.85
C11orf54-201ENST00000331239 DHX35Q9H5Z1 703 aaKnown RBP9.77□□□□□ -0.85
C11orf54-201ENST00000331239 TRPC7Q9HCX4 862 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 MARK1Q9P0L2 795 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 MYO9BQ13459 2157 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 TYW5A2RUC4 315 aaKnown RBP9.77□□□□□ -0.85
C11orf54-201ENST00000331239 HACD1B0YJ81 288 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 E7EVH7 732 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 F5H5T6 163 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 LEFTY2O00292 366 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 TBX10O75333 385 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 TBX18O95935 607 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 FAM107AO95990 144 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 IGFBP4P22692 258 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 IL4RP24394 825 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 SEC24CP53992 1094 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 CYP4F8P98187 520 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 KLF1Q13351 362 aaPredicted RBP9.77□□□□□ -0.85
C11orf54-201ENST00000331239 CYP1B1Q16678 543 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 SLC5A9Q2M3M2 681 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 LEXMQ3ZCV2 418 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 MS4A13Q5J8X5 152 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 ZDHHC24Q6UX98 284 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 RFX8Q6ZV50 586 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 MIB1Q86YT6 1006 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 HJURPQ8NCD3 748 aaPredicted RBP9.77□□□□□ -0.85
C11orf54-201ENST00000331239 RAPGEF5Q92565 580 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 MAGOHBQ96A72 148 aaKnown RBP9.77□□□□□ -0.85
C11orf54-201ENST00000331239 ASB16Q96NS5 453 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 CCT8L2Q96SF2 557 aa9.77□□□□□ -0.85
C11orf54-201ENST00000331239 SLC2A11Q9BYW1 496 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms