RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 TMEM138Q9NPI0 162 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 CD274Q9NZQ7 290 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 CLCA1A8K7I4 914 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 KRT34O76011 436 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 CRTAMO95727 393 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 PRIM2P49643 509 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 EIF5AL1Q6IS14 154 aaKnown RBP9.91□□□□□ -0.82
COL12A1-201ENST00000322507 ARPINQ7Z6K5 226 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 VCPIP1Q96JH7 1222 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 LINC00854A0A1B0GVQ3 168 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 OPLAHO14841 1288 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 XIAPP98170 497 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 PLA2G4FQ68DD2 849 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 C1orf54Q8WWF1 131 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 PHACTR1Q9C0D0 580 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 MROH2AA6NES4 1674 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 CLCN2P51788 898 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 TMEM132BQ14DG7 1078 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 SUSD4Q5VX71 490 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 PLCZ1Q86YW0 608 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 CCDC24Q8N4L8 307 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 C1QTNF1Q9BXJ1 281 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 RARBP10826 455 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 PCSK2P16519 638 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 AADATQ8N5Z0 425 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 FEZF2Q8TBJ5 459 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 LRRC1Q9BTT6 524 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 AHSPQ9NZD4 102 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 TADA2AO75478 443 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 SPARCP09486 303 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 ERMARDQ5T6L9 678 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 DENND5AQ6IQ26 1287 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 NT5DC4Q86YG4 428 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 CMTR2Q8IYT2 770 aaKnown RBP9.91□□□□□ -0.82
COL12A1-201ENST00000322507 ELMO2Q96JJ3 720 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 ADGRE3Q9BY15 652 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 PIN4Q9Y237 131 aaKnown RBP9.91□□□□□ -0.82
COL12A1-201ENST00000322507 FARSAQ9Y285 508 aaKnown RBP9.91□□□□□ -0.82
COL12A1-201ENST00000322507 FSBPO95073 299 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 C11orf63Q6NUN7 778 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 USP51Q70EK9 711 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 GPRASP2Q96D09 838 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 HINFPQ9BQA5 517 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 SORCS3Q9UPU3 1222 aa9.91□□□□□ -0.82
COL12A1-201ENST00000322507 CPS1P31327 1500 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 GYS1P13807 737 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 ENO3P13929 434 aaPredicted RBP9.9□□□□□ -0.82
COL12A1-201ENST00000322507 CLEC16AQ2KHT3 1053 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 INTS6LQ5JSJ4 861 aaKnown RBP9.9□□□□□ -0.82
COL12A1-201ENST00000322507 SEL1L3Q68CR1 1132 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 ZCCHC8Q6NZY4 707 aaKnown RBP9.9□□□□□ -0.82
COL12A1-201ENST00000322507 SNX31Q8N9S9 440 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 C9orf16Q9BUW7 83 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 MUC3BQ9H195 1237 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 GPAMQ9HCL2 828 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 RBM47A0AV96 593 aaKnown RBP9.9□□□□□ -0.82
COL12A1-201ENST00000322507 ALDH1A3P47895 512 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 LDHDQ86WU2 507 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 POC5Q8NA72 575 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 TERB2Q8NHR7 220 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 RIN2Q8WYP3 895 aaPredicted RBP9.9□□□□□ -0.82
COL12A1-201ENST00000322507 PCDH12Q9NPG4 1184 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 INPP5FQ9Y2H2 1132 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 NEURL4Q96JN8 1562 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 RPS6KA5O75582 802 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 FYNP06241 537 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 PGK2P07205 417 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 MAPTP10636 758 aaKnown RBP9.9□□□□□ -0.82
COL12A1-201ENST00000322507 PIK3CGP48736 1102 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 CDK7P50613 346 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 ZNF425Q6IV72 752 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 REPS1Q96D71 796 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 CYP26A1O43174 497 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 ATP9BO43861 1147 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 SIN3BO75182 1162 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 ATP6V1C1P21283 382 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 RPL5P46777 297 aaKnown RBP9.9□□□□□ -0.82
COL12A1-201ENST00000322507 GEMP55040 296 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 VAC14Q08AM6 782 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 CYB5R4Q7L1T6 521 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 CLCC1Q96S66 551 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 PI4K2AQ9BTU6 479 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 PRKD2Q9BZL6 878 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 TBC1D14Q9P2M4 693 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 VPS51Q9UID3 782 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 ANKRD65E5RJM6 399 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 RARGP13631 454 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 IFNGR2P38484 337 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 BIKQ13323 160 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 TRPV3Q8NET8 790 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 CD163L1Q9NR16 1453 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 PGK1P00558 417 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 SLC11A2P49281 568 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 PLD1Q13393 1074 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 TCTEX1D2Q8WW35 142 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 WDR24Q96S15 920 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 SIK2Q9H0K1 926 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 RUVBL1Q9Y265 456 aaKnown RBP9.9□□□□□ -0.82
COL12A1-201ENST00000322507 PTPRUQ92729 1446 aa9.9□□□□□ -0.82
COL12A1-201ENST00000322507 TGM2P21980 687 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms