RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 MARVELD2Q8N4S9 558 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 CHST13Q8NET6 341 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 DCUN1D1Q96GG9 259 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 RBM38Q9H0Z9 239 aaKnown RBP13.77□□□□□ -0.21
SKA3-202ENST00000314759 CDH19Q9H159 772 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 NDUFA13Q9P0J0 144 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 AP4E1Q9UPM8 1137 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 PTPRFP10586 1907 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 DENRO43583 198 aaKnown RBP13.77□□□□□ -0.21
SKA3-202ENST00000314759 DGKIO75912 1065 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 MX2P20592 715 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 MLH1P40692 756 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 ACBD5Q5T8D3 534 aaPredicted RBP13.77□□□□□ -0.21
SKA3-202ENST00000314759 EFCAB12Q6NXP0 572 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 CLEC4CQ8WTT0 213 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 SLC35F5Q8WV83 523 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 PGBD4Q96DM1 585 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 OR52B2Q96RD2 323 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 GPR20Q99678 358 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 CEP41Q9BYV8 373 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 SNX15Q9NRS6 342 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 FAM49BQ9NUQ9 324 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 SYBUQ9NX95 663 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 PSMD13Q9UNM6 376 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 SSX2IPQ9Y2D8 614 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 CDY2AQ9Y6F7 541 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 CDY1Q9Y6F8 540 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 SSC5DA1L4H1 1573 aa13.77□□□□□ -0.21
SKA3-202ENST00000314759 F7P08709 466 aaPredicted RBP13.76□□□□□ -0.21
SKA3-202ENST00000314759 SH3BGRP55822 239 aaPredicted RBP13.76□□□□□ -0.21
SKA3-202ENST00000314759 ZNF280AP59817 542 aaPredicted RBP13.76□□□□□ -0.21
SKA3-202ENST00000314759 TMEM62Q0P6H9 643 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 TMEM259Q4ZIN3 620 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 ACOT1Q86TX2 421 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 PYROXD2Q8N2H3 581 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 CCDC185Q8N715 623 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 AGR3Q8TD06 166 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 CNBD2Q96M20 576 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 C11orf84Q9BUA3 381 aaPredicted RBP13.76□□□□□ -0.21
SKA3-202ENST00000314759 MAF1Q9H063 256 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 C6orf203Q9P0P8 240 aaPredicted RBP13.76□□□□□ -0.21
SKA3-202ENST00000314759 TXNDC16Q9P2K2 825 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 STK39Q9UEW8 545 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 DOCK1Q14185 1865 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 AIM2O14862 343 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 ATP6V1G1O75348 118 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 HSPA4LO95757 839 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 TGFB3P10600 412 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 GOT1P17174 413 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 HSPA1LP34931 641 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 SERPINB5P36952 375 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 EMP3P54852 163 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 MYBPC1Q00872 1141 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 NAB1Q13506 487 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 TMEM132DQ14C87 1099 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 DCAF15Q66K64 600 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 POTEAQ6S8J7 498 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 DCLK2Q8N568 766 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 SNRNP27Q8WVK2 155 aaKnown RBP13.76□□□□□ -0.21
SKA3-202ENST00000314759 ATXN7L3BQ96GX2 97 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 CPB2Q96IY4 423 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 SENP6Q9GZR1 1112 aaPredicted RBP13.76□□□□□ -0.21
SKA3-202ENST00000314759 ASB7Q9H672 318 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 HEMK1Q9Y5R4 338 aaPredicted RBP13.76□□□□□ -0.21
SKA3-202ENST00000314759 GMEB1Q9Y692 573 aa13.76□□□□□ -0.21
SKA3-202ENST00000314759 A0A1B0GTW7 788 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 GLDCP23378 1020 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 MSX2P35548 267 aaPredicted RBP13.75□□□□□ -0.21
SKA3-202ENST00000314759 GP5P40197 560 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 NUMBP49757 651 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 CCDC153Q494R4 210 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 EXOC8Q8IYI6 725 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 GAB3Q8WWW8 586 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 CENPIQ92674 756 aaPredicted RBP13.75□□□□□ -0.21
SKA3-202ENST00000314759 TMEM165Q9HC07 324 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 GGA3Q9NZ52 723 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 GTF2IRD1Q9UHL9 959 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 G3V2L1 256 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 CRTAMO95727 393 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 DESP17661 470 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 SLC5A2P31639 672 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 NUDT2P50583 147 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 GTF2A2P52657 109 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 PPM1LQ5SGD2 360 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 SH2D4BQ5SQS7 431 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 METTL21CQ5VZV1 264 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 CEP70Q8NHQ1 597 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 MOCOSQ96EN8 888 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 CERS2Q96G23 380 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 FCRL3Q96P31 734 aaPredicted RBP13.75□□□□□ -0.21
SKA3-202ENST00000314759 PPP1R16BQ96T49 567 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 PRPF18Q99633 342 aaKnown RBP13.75□□□□□ -0.21
SKA3-202ENST00000314759 LPIN3Q9BQK8 851 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 VPS33BQ9H267 617 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 DPP3Q9NY33 737 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 USP3Q9Y6I4 520 aa13.75□□□□□ -0.21
SKA3-202ENST00000314759 GOLGA8QA0A0J9YX86 632 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 GOLGA8OA6NCC3 632 aa13.74□□□□□ -0.21
SKA3-202ENST00000314759 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.74□□□□□ -0.21
SKA3-202ENST00000314759 GOLGA8NF8WBI6 632 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms