RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 NARSO43776 548 aaKnown RBP23.08■■□□□ 1.28
CCDC85B-201ENST00000312579 BMP1P13497 986 aa23.08■■□□□ 1.28
CCDC85B-201ENST00000312579 ERCC2P18074 760 aa23.08■■□□□ 1.28
CCDC85B-201ENST00000312579 HOXC13P31276 330 aa23.08■■□□□ 1.28
CCDC85B-201ENST00000312579 NUMBP49757 651 aa23.08■■□□□ 1.28
CCDC85B-201ENST00000312579 DYNLT1P63172 113 aa23.08■■□□□ 1.28
CCDC85B-201ENST00000312579 TAZQ16635 292 aa23.08■■□□□ 1.28
CCDC85B-201ENST00000312579 MPPE1Q53F39 396 aa23.08■■□□□ 1.28
CCDC85B-201ENST00000312579 HJURPQ8NCD3 748 aaPredicted RBP23.08■■□□□ 1.28
CCDC85B-201ENST00000312579 ATXN2LQ8WWM7 1075 aaKnown RBP23.08■■□□□ 1.28
CCDC85B-201ENST00000312579 ATP2A3Q93084 1043 aa23.08■■□□□ 1.28
CCDC85B-201ENST00000312579 FAF2Q96CS3 445 aa23.08■■□□□ 1.28
CCDC85B-201ENST00000312579 MS4A14Q96JA4 679 aa23.08■■□□□ 1.28
CCDC85B-201ENST00000312579 RNF157Q96PX1 679 aa23.08■■□□□ 1.28
CCDC85B-201ENST00000312579 ASB2Q96Q27 587 aa23.08■■□□□ 1.28
CCDC85B-201ENST00000312579 ECT2Q9H8V3 914 aa23.08■■□□□ 1.28
CCDC85B-201ENST00000312579 IGSF9Q9P2J2 1179 aa23.08■■□□□ 1.28
CCDC85B-201ENST00000312579 EFCAB8A8MWE9 144 aa23.07■■□□□ 1.28
CCDC85B-201ENST00000312579 CEP104O60308 925 aa23.07■■□□□ 1.28
CCDC85B-201ENST00000312579 HOXD9P28356 352 aaPredicted RBP23.07■■□□□ 1.28
CCDC85B-201ENST00000312579 HCAR3P49019 387 aa23.07■■□□□ 1.28
CCDC85B-201ENST00000312579 TFDP3Q5H9I0 405 aa23.07■■□□□ 1.28
CCDC85B-201ENST00000312579 ACBD5Q5T8D3 534 aaPredicted RBP23.07■■□□□ 1.28
CCDC85B-201ENST00000312579 NLRP14Q86W24 1093 aa23.07■■□□□ 1.28
CCDC85B-201ENST00000312579 CARNMT1Q8N4J0 409 aa23.07■■□□□ 1.28
CCDC85B-201ENST00000312579 NAT16Q8N8M0 369 aa23.07■■□□□ 1.28
CCDC85B-201ENST00000312579 WFDC5Q8TCV5 224 aa23.07■■□□□ 1.28
CCDC85B-201ENST00000312579 OSBPL8Q9BZF1 889 aa23.07■■□□□ 1.28
CCDC85B-201ENST00000312579 CARD9Q9H257 536 aa23.07■■□□□ 1.28
CCDC85B-201ENST00000312579 SMARCAL1Q9NZC9 954 aa23.07■■□□□ 1.28
CCDC85B-201ENST00000312579 RCOR3Q9P2K3 495 aaPredicted RBP23.07■■□□□ 1.28
CCDC85B-201ENST00000312579 TCRBV7S2A1N4TA0A589 114 aa23.06■■□□□ 1.28
CCDC85B-201ENST00000312579 PDE2AO00408 941 aaPredicted RBP23.06■■□□□ 1.28
CCDC85B-201ENST00000312579 NFATC1O95644 943 aa23.06■■□□□ 1.28
CCDC85B-201ENST00000312579 CYBBP04839 570 aa23.06■■□□□ 1.28
CCDC85B-201ENST00000312579 ADH5P11766 374 aa23.06■■□□□ 1.28
CCDC85B-201ENST00000312579 TYRP14679 529 aa23.06■■□□□ 1.28
CCDC85B-201ENST00000312579 RUNX3Q13761 415 aa23.06■■□□□ 1.28
CCDC85B-201ENST00000312579 ZNF212Q9UDV6 495 aa23.06■■□□□ 1.28
CCDC85B-201ENST00000312579 PRKAG3Q9UGI9 489 aa23.06■■□□□ 1.28
CCDC85B-201ENST00000312579 DOCK4Q8N1I0 1966 aa23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 DCLK1O15075 740 aa23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 PENKP01210 267 aaPredicted RBP23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 RHOQP17081 205 aa23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 GAB4Q2WGN9 574 aa23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 FSCBQ5H9T9 825 aa23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 SEL1L2Q5TEA6 688 aa23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 NAIF1Q69YI7 327 aaPredicted RBP23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 ADAT2Q7Z6V5 191 aaKnown RBP23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 C12orf40Q86WS4 652 aa23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 TP53INP2Q8IXH6 220 aa23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 CCDC33Q8N5R6 958 aa23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 NPWQ8N729 165 aa23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 OR52K2Q8NGK3 314 aa23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 NXPE3Q969Y0 559 aa23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 MAK16Q9BXY0 300 aaKnown RBP23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 CATSPERBQ9H7T0 1116 aa23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 V9GYY5 206 aaPredicted RBP23.05■■□□□ 1.28
CCDC85B-201ENST00000312579 TRIM24O15164 1050 aa23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 CST8O60676 142 aa23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 MAP3K6O95382 1288 aa23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 ADH1CP00326 375 aa23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 SOX9P48436 509 aa23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 ZNF135P52742 658 aaPredicted RBP23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 CDH4P55283 916 aa23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 COPS2P61201 443 aa23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 PPP2R5EQ16537 467 aa23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 TEX35Q5T0J7 233 aa23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 IER5LQ5T953 404 aa23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 NCBP2-AS2Q69YL0 99 aa23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 NPNTQ6UXI9 565 aa23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 ZNF572Q7Z3I7 529 aaPredicted RBP23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 RTL3Q8N8U3 475 aaKnown RBP23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 UBXN4Q92575 508 aa23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 CELF6Q96J87 481 aaKnown RBP23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 TMEM248Q9NWD8 314 aa23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 MARK1Q9P0L2 795 aa23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 SAE1Q9UBE0 346 aaPredicted RBP23.04■■□□□ 1.28
CCDC85B-201ENST00000312579 A0A1B0GVM2 712 aa23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 TYW5A2RUC4 315 aaKnown RBP23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 TCAF2A6NFQ2 919 aa23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 FGF10O15520 208 aaPredicted RBP23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 LUC7L3O95232 432 aaKnown RBP23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 HTR7P34969 479 aa23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 SLC6A11P48066 632 aa23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 ASTLQ6HA08 431 aaPredicted RBP23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 C1orf228Q6PIY5 440 aa23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 VSIG1Q86XK7 387 aa23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 CPA6Q8N4T0 437 aa23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 PLD5Q8N7P1 536 aa23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 HAUS1Q96CS2 278 aa23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 KLC2Q9H0B6 622 aa23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 COL4A3Q01955 1670 aa23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 C19orf67A6NJJ6 358 aa23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 ZNF487B1APH4 448 aa23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 H0Y626 953 aa23.03■■□□□ 1.28
CCDC85B-201ENST00000312579 PGRMC1O00264 195 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms