RNA–Protein interactions for RNA: ENST00000307180.4

TSNARE1-201, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TSNARE1, Length 1,907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-201ENST00000307180 CACNA2D1P54289 1103 aa16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 HDAC4P56524 1084 aa16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 NTHL1P78549 312 aa16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 CA9Q16790 459 aa16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 PTCRAQ6ISU1 281 aaPredicted RBP16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 PAQR9Q6ZVX9 377 aa16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 SLC26A9Q7LBE3 791 aa16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 GRASPQ7Z6J2 395 aaPredicted RBP16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 GPR149Q86SP6 731 aa16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 TRABD2AQ86V40 505 aa16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 VSIG1Q86XK7 387 aa16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 PQLC3Q8N755 202 aa16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 CLEC4CQ8WTT0 213 aa16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 CKAP2Q8WWK9 683 aa16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 ELAC2Q9BQ52 826 aaKnown RBP16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 SNRNP25Q9BV90 132 aaKnown RBP16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 PPCSQ9HAB8 311 aa16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 USP29Q9HBJ7 922 aa16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 NKIRAS1Q9NYS0 192 aa16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 SLC24A2Q9UI40 661 aa16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 XPO7Q9UIA9 1087 aaKnown RBP16.33■□□□□ 0.2
TSNARE1-201ENST00000307180 CLUHO75153 1309 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 TCP11X1B4DZS4 312 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 APOL1O14791 398 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 MDM4O15151 490 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 XYLBO75191 536 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 IL9P15248 144 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 TFE3P19532 575 aaPredicted RBP16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 TGM2P21980 687 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 SCNN1AP37088 669 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 ACADSBP45954 432 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 NRLP54845 237 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 BASP1P80723 227 aaKnown RBP16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 SMAD4Q13485 552 aaKnown RBP16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 ATAT1Q5SQI0 421 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 ARHGEF18Q6ZSZ5 1173 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 ARCQ7LC44 396 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 FAM35AQ86V20 835 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 FUKQ8N0W3 1084 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 PDIK1LQ8N165 341 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 PCDH19Q8TAB3 1148 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 CENPIQ92674 756 aaPredicted RBP16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 FUBP3Q96I24 572 aaKnown RBP eCLIP16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 NSRP1Q9H0G5 558 aaKnown RBP16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 MLXIPLQ9NP71 852 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 TMEM30AQ9NV96 361 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 RABGEF1Q9UJ41 708 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 C2orf16Q68DN1 1984 aa16.32■□□□□ 0.2
TSNARE1-201ENST00000307180 DOCK6Q96HP0 2047 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 GOLGA6L7A0A1B0GV03 622 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 TMEM63AO94886 807 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 SP100P23497 879 aaPredicted RBP16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 HOXA9P31269 272 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 PHBP35232 272 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 EPHB3P54753 998 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 RASA2Q15283 850 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 BBS9Q3SYG4 887 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 SLC9A4Q6AI14 798 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 PPP1R21Q6ZMI0 780 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 C3orf62Q6ZUJ4 267 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 PALM2Q8IXS6 379 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 ELMOD1Q8N336 334 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 ANKS4BQ8N8V4 417 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 ATP11CQ8NB49 1132 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 GDAP1Q8TB36 358 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 HSFY1Q96LI6 401 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 ZNF512Q96ME7 567 aaPredicted RBP16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 KCNK16Q96T55 309 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 CORO1BQ9BR76 489 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 SAMD15Q9P1V8 674 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 DNMT3BQ9UBC3 853 aaKnown RBP16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 SUFUQ9UMX1 484 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 HEY1Q9Y5J3 304 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 ZNF487B1APH4 448 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 FSBPO95073 299 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 SSTR1P30872 391 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 L1CAMP32004 1257 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 STX2P32856 288 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 GEMIN4P57678 1058 aaKnown RBP16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 MRPS5P82675 430 aaKnown RBP16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 PPP6R3Q5H9R7 873 aaPredicted RBP16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 EFHC2Q5JST6 749 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 HS6ST3Q8IZP7 471 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 FBXO36Q8NEA4 188 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 RIPOR3Q96MK2 946 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 ZNF670Q9BS34 389 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 TRABDQ9H4I3 376 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 POMKQ9H5K3 350 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 KRT82Q9NSB4 513 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 HSFX1Q9UBD0 423 aa16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 MAGED2Q9UNF1 606 aaPredicted RBP16.31■□□□□ 0.2
TSNARE1-201ENST00000307180 FAM47DPA6NHR8 397 aa16.3■□□□□ 0.2
TSNARE1-201ENST00000307180 AP1G2O75843 785 aa16.3■□□□□ 0.2
TSNARE1-201ENST00000307180 BEST1O76090 585 aa16.3■□□□□ 0.2
TSNARE1-201ENST00000307180 KRT15P19012 456 aa16.3■□□□□ 0.2
TSNARE1-201ENST00000307180 PLD1Q13393 1074 aa16.3■□□□□ 0.2
TSNARE1-201ENST00000307180 ITIH4Q14624 930 aa16.3■□□□□ 0.2
TSNARE1-201ENST00000307180 CBX2Q14781 532 aaPredicted RBP16.3■□□□□ 0.2
TSNARE1-201ENST00000307180 TAF12Q16514 161 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms