RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 VAV1P15498 845 aa18■□□□□ 0.47
KRT28-201ENST00000306658 CORO1AP31146 461 aaKnown RBP18■□□□□ 0.47
KRT28-201ENST00000306658 BASP1P80723 227 aaKnown RBP18■□□□□ 0.47
KRT28-201ENST00000306658 SMAD3P84022 425 aaKnown RBP18■□□□□ 0.47
KRT28-201ENST00000306658 CYP4F8P98187 520 aa18■□□□□ 0.47
KRT28-201ENST00000306658 SPDYCQ5MJ68 293 aa18■□□□□ 0.47
KRT28-201ENST00000306658 NADSYN1Q6IA69 706 aa18■□□□□ 0.47
KRT28-201ENST00000306658 ARHGEF18Q6ZSZ5 1173 aa18■□□□□ 0.47
KRT28-201ENST00000306658 NLRP14Q86W24 1093 aa18■□□□□ 0.47
KRT28-201ENST00000306658 TP53INP2Q8IXH6 220 aa18■□□□□ 0.47
KRT28-201ENST00000306658 ZCCHC9Q8N567 271 aaKnown RBP18■□□□□ 0.47
KRT28-201ENST00000306658 LEMD2Q8NC56 503 aa18■□□□□ 0.47
KRT28-201ENST00000306658 CPT1BQ92523 772 aa18■□□□□ 0.47
KRT28-201ENST00000306658 CELF6Q96J87 481 aaKnown RBP18■□□□□ 0.47
KRT28-201ENST00000306658 SLC28A3Q9HAS3 691 aa18■□□□□ 0.47
KRT28-201ENST00000306658 RAB6BQ9NRW1 208 aa18■□□□□ 0.47
KRT28-201ENST00000306658 FARP1Q9Y4F1 1045 aaPredicted RBP18■□□□□ 0.47
KRT28-201ENST00000306658 DOCK4Q8N1I0 1966 aa18■□□□□ 0.47
KRT28-201ENST00000306658 OBSL1O75147 1896 aa18■□□□□ 0.47
KRT28-201ENST00000306658 A0A0A0MRY4 1105 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 GOLGA6L7A0A1B0GV03 622 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 A0A1W2PRU2 124 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 PER2O15055 1255 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 RFPL2O75678 378 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 LATS1O95835 1130 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 IRF1P10914 325 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 NDST2P52849 883 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 EPHA5P54756 1037 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 C5orf22Q49AR2 442 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 RABGAP1LQ5R372 815 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 ANKRD20A2Q5SQ80 823 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 ADGRF1Q5T601 910 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 ANKRD20A1Q5TYW2 823 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 ANKRD20A3Q5VUR7 823 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 ALS2CLQ60I27 953 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 CCDC25Q86WR0 208 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 LGI2Q8N0V4 545 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 UMODL1-AS1Q8N2C9 162 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 MAB21L3Q8N8X9 362 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 TSEN2Q8NCE0 465 aaKnown RBP17.99■□□□□ 0.47
KRT28-201ENST00000306658 CCDC110Q8TBZ0 833 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 ARNTL2Q8WYA1 636 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 IGSF8Q969P0 613 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 SPATA13Q96N96 652 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 TSGA13Q96PP4 275 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 TXLNGYQ9BZA5 131 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 SMPD4Q9NXE4 827 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 ZDHHC7Q9NXF8 308 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 SEPT10Q9P0V9 454 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 DENND4CQ5VZ89 1909 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 TRAV19A0A0A6YYK7 116 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 SPDYE4A6NLX3 237 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 RNF103O00237 685 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 DFFAO00273 331 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 OPHN1O60890 802 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 KLKB1P03952 638 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 CKMP06732 381 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 CCNCP24863 283 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 PMS2P54278 862 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 GPS2Q13227 327 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 FAM133BQ5BKY9 247 aaKnown RBP17.99■□□□□ 0.47
KRT28-201ENST00000306658 CFAP58Q5T655 872 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 AFMIDQ63HM1 303 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 RBM23Q86U06 439 aaKnown RBP17.99■□□□□ 0.47
KRT28-201ENST00000306658 ARHGAP12Q8IWW6 846 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 CCDC13Q8IYE1 715 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 TAB3Q8N5C8 712 aaPredicted RBP17.99■□□□□ 0.47
KRT28-201ENST00000306658 ATPAF2Q8N5M1 289 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 UBLCP1Q8WVY7 318 aaPredicted RBP17.99■□□□□ 0.47
KRT28-201ENST00000306658 PRCCQ92733 491 aaPredicted RBP17.99■□□□□ 0.47
KRT28-201ENST00000306658 ZFRQ96KR1 1074 aaKnown RBP17.99■□□□□ 0.47
KRT28-201ENST00000306658 SLC22A12Q96S37 553 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 VAT1Q99536 393 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 TLE6Q9H808 572 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 AGO1Q9UL18 857 aaKnown RBP17.99■□□□□ 0.47
KRT28-201ENST00000306658 CPQQ9Y646 472 aa17.99■□□□□ 0.47
KRT28-201ENST00000306658 GOLGA6BA6NDN3 693 aa17.98■□□□□ 0.47
KRT28-201ENST00000306658 CHADO15335 359 aa17.98■□□□□ 0.47
KRT28-201ENST00000306658 CNTN5O94779 1100 aa17.98■□□□□ 0.47
KRT28-201ENST00000306658 DDX6P26196 483 aaKnown RBP eCLIP17.98■□□□□ 0.47
KRT28-201ENST00000306658 HSD17B3P37058 310 aa17.98■□□□□ 0.47
KRT28-201ENST00000306658 MAPKAPK2P49137 400 aa17.98■□□□□ 0.47
KRT28-201ENST00000306658 SLC7A9P82251 487 aa17.98■□□□□ 0.47
KRT28-201ENST00000306658 ALFQ53S48 1182 aa17.98■□□□□ 0.47
KRT28-201ENST00000306658 TFAP2DQ7Z6R9 452 aa17.98■□□□□ 0.47
KRT28-201ENST00000306658 NAT8LQ8N9F0 302 aa17.98■□□□□ 0.47
KRT28-201ENST00000306658 SLC39A8Q9C0K1 460 aa17.98■□□□□ 0.47
KRT28-201ENST00000306658 NDFIP2Q9NV92 336 aa17.98■□□□□ 0.47
KRT28-201ENST00000306658 LSM7Q9UK45 103 aaKnown RBP17.98■□□□□ 0.47
KRT28-201ENST00000306658 HCFC2Q9Y5Z7 792 aa17.98■□□□□ 0.47
KRT28-201ENST00000306658 CHD9Q3L8U1 2897 aa17.98■□□□□ 0.47
KRT28-201ENST00000306658 CHD7Q9P2D1 2997 aa17.98■□□□□ 0.47
KRT28-201ENST00000306658 H0YGN5 161 aa17.97■□□□□ 0.47
KRT28-201ENST00000306658 POU2F2P09086 479 aa17.97■□□□□ 0.47
KRT28-201ENST00000306658 SLC6A4P31645 630 aa17.97■□□□□ 0.47
KRT28-201ENST00000306658 CHKAP35790 457 aa17.97■□□□□ 0.47
KRT28-201ENST00000306658 FDFT1P37268 417 aa17.97■□□□□ 0.47
KRT28-201ENST00000306658 WASHC5Q12768 1159 aa17.97■□□□□ 0.47
KRT28-201ENST00000306658 ARHGAP15Q53QZ3 475 aa17.97■□□□□ 0.47
KRT28-201ENST00000306658 TIGD7Q6NT04 549 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms