RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 PTPN1P18031 435 aaKnown RBP13.23□□□□□ -0.29
HIF3A-204ENST00000300862 PGAM1P18669 254 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 VHLP40337 213 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 TKTL1P51854 596 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 IFRD2Q12894 506 aaPredicted RBP13.23□□□□□ -0.29
HIF3A-204ENST00000300862 VWA5B1Q5TIE3 1220 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 TIFABQ6ZNK6 161 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 ARCQ7LC44 396 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 APLFQ8IW19 511 aaPredicted RBP13.23□□□□□ -0.29
HIF3A-204ENST00000300862 HACE1Q8IYU2 909 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 TNS4Q8IZW8 715 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 SIX6OS1Q8N1H7 587 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 GALNT15Q8N3T1 639 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 SLC25A41Q8N5S1 370 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 POU5F2Q8N7G0 328 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 TNIP3Q96KP6 325 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 NPY6RQ99463 290 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 PNPOQ9NVS9 261 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 KLHL8Q9P2G9 620 aaPredicted RBP13.23□□□□□ -0.29
HIF3A-204ENST00000300862 STOML1Q9UBI4 398 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 LRCH1Q9Y2L9 728 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 MRPL42Q9Y6G3 142 aaKnown RBP13.23□□□□□ -0.29
HIF3A-204ENST00000300862 NRCAMQ92823 1304 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 YJEFN3A6XGL0 299 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 BIRC5O15392 142 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 LMNAP02545 664 aaKnown RBP13.23□□□□□ -0.29
HIF3A-204ENST00000300862 PRKCGP05129 697 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 FYNP06241 537 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 TYK2P29597 1187 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 SCNN1AP37088 669 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 SLC1A6P48664 564 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 PGGT1BP53609 377 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 BEX3Q00994 111 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 PCLAFQ15004 111 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 PDK1Q15118 436 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 KYAT3Q6YP21 454 aaKnown RBP13.23□□□□□ -0.29
HIF3A-204ENST00000300862 CLEC20AQ6ZU45 233 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 GPRIN1Q7Z2K8 1008 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 APBB2Q92870 758 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 STMN2Q93045 179 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 AGAP2Q99490 1192 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 HNRNPABQ99729 332 aaKnown RBP13.23□□□□□ -0.29
HIF3A-204ENST00000300862 CCDC106Q9BWC9 280 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 ULBP1Q9BZM6 244 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 ACSS2Q9NR19 701 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 KRT82Q9NSB4 513 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 TMEM30AQ9NV96 361 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 UBP1Q9NZI7 540 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 TXNDC16Q9P2K2 825 aa13.23□□□□□ -0.29
HIF3A-204ENST00000300862 DOCK3Q8IZD9 2030 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 DAB1O75553 588 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 F2P00734 622 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 C6orf222P0C671 652 aaPredicted RBP13.22□□□□□ -0.29
HIF3A-204ENST00000300862 MLNP12872 115 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 ERCC2P18074 760 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 NOS2P35228 1153 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 CACNA2D1P54289 1103 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 GRB14Q14449 540 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 SV2CQ496J9 727 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 IQSEC1Q6DN90 963 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 TWF2Q6IBS0 349 aaKnown RBP13.22□□□□□ -0.29
HIF3A-204ENST00000300862 ZNF467Q7Z7K2 595 aaPredicted RBP13.22□□□□□ -0.29
HIF3A-204ENST00000300862 NPWQ8N729 165 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 SMG8Q8ND04 991 aaKnown RBP13.22□□□□□ -0.29
HIF3A-204ENST00000300862 MOCOSQ96EN8 888 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 OXCT2Q9BYC2 517 aaPredicted RBP13.22□□□□□ -0.29
HIF3A-204ENST00000300862 CAB39LQ9H9S4 337 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 CPSF2Q9P2I0 782 aaKnown RBP13.22□□□□□ -0.29
HIF3A-204ENST00000300862 TAGLN3Q9UI15 199 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 SMIM35A0A1B0GVV1 85 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 SPECC1L-ADORA2AF8WAN1 911 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 GOLGA8TH3BQL2 631 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 TOMM70O94826 608 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 TPH1P17752 444 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 GLUD2P49448 558 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 DPYSQ14117 519 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 MFSD10Q14728 455 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 DLG2Q15700 870 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 USP50Q70EL3 339 aaPredicted RBP13.22□□□□□ -0.29
HIF3A-204ENST00000300862 MAVSQ7Z434 540 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 TMPRSS6Q8IU80 811 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 PLD6Q8N2A8 252 aaKnown RBP13.22□□□□□ -0.29
HIF3A-204ENST00000300862 DNAAF3Q8N9W5 541 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 PIWIL2Q8TC59 973 aaKnown RBP13.22□□□□□ -0.29
HIF3A-204ENST00000300862 EDEM1Q92611 657 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 WNT8BQ93098 351 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 ZNF669Q96BR6 464 aaPredicted RBP13.22□□□□□ -0.29
HIF3A-204ENST00000300862 GORASP1Q9BQQ3 440 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 RHOBTB2Q9BYZ6 727 aa13.22□□□□□ -0.29
HIF3A-204ENST00000300862 MBLAC1A4D2B0 266 aaPredicted RBP13.21□□□□□ -0.29
HIF3A-204ENST00000300862 PTGESO14684 152 aa13.21□□□□□ -0.29
HIF3A-204ENST00000300862 DCLK1O15075 740 aa13.21□□□□□ -0.29
HIF3A-204ENST00000300862 ATP9BO43861 1147 aa13.21□□□□□ -0.29
HIF3A-204ENST00000300862 GLRA3O75311 464 aa13.21□□□□□ -0.29
HIF3A-204ENST00000300862 USP17L7P0C7H9 530 aa13.21□□□□□ -0.29
HIF3A-204ENST00000300862 KCNE1P15382 129 aa13.21□□□□□ -0.29
HIF3A-204ENST00000300862 YBX3P16989 372 aaKnown RBP eCLIP13.21□□□□□ -0.29
HIF3A-204ENST00000300862 CNTFP26441 200 aa13.21□□□□□ -0.29
HIF3A-204ENST00000300862 PNPLA4P41247 253 aa13.21□□□□□ -0.29
HIF3A-204ENST00000300862 ITGA9Q13797 1035 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms