RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 AXIN2Q9Y2T1 843 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 STARD13Q9Y3M8 1113 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 TMEM114B3SHH9 223 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.29□□□□□ -0.44
PCF11-201ENST00000298281 LSM8O95777 96 aaKnown RBP12.29□□□□□ -0.44
PCF11-201ENST00000298281 YY1P25490 414 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 SLFN11Q7Z7L1 901 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 KCTD14Q9BQ13 255 aaPredicted RBP12.29□□□□□ -0.44
PCF11-201ENST00000298281 CYP3A43Q9HB55 503 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 CYP4F12Q9HCS2 524 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 AGPAT3Q9NRZ7 376 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 ADSLP30566 484 aaPredicted RBP12.29□□□□□ -0.44
PCF11-201ENST00000298281 CACNA2D1P54289 1103 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 MKRN4PQ13434 485 aaPredicted RBP12.29□□□□□ -0.44
PCF11-201ENST00000298281 ATP6AP1LQ52LC2 224 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 TPCN2Q8NHX9 752 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 HNRNPLLQ8WVV9 542 aaKnown RBP12.29□□□□□ -0.44
PCF11-201ENST00000298281 RERGQ96A58 199 aaPredicted RBP12.29□□□□□ -0.44
PCF11-201ENST00000298281 PDGFCQ9NRA1 345 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 APOC1P02654 83 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 GSTM5P46439 218 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 AKR1D1P51857 326 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 ANGEL2Q5VTE6 544 aaKnown RBP12.29□□□□□ -0.44
PCF11-201ENST00000298281 ARRDC4Q8NCT1 418 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 JSRP1Q96MG2 331 aaPredicted RBP12.29□□□□□ -0.44
PCF11-201ENST00000298281 ELOVL6Q9H5J4 265 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 SUPT20HL2P0C7V6 817 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 RGS8P57771 180 aaPredicted RBP12.29□□□□□ -0.44
PCF11-201ENST00000298281 ITIH4Q14624 930 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 EEF1AKMT1Q8WVE0 214 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 CHMP1AQ9HD42 196 aaPredicted RBP12.29□□□□□ -0.44
PCF11-201ENST00000298281 TOR4AQ9NXH8 423 aa12.29□□□□□ -0.44
PCF11-201ENST00000298281 UBE2QL1A1L167 161 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 MAGEA13PA6NCF6 341 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 TTC34A8MYJ7 566 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 GTF2A2P52657 109 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 MTM1Q13496 603 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 GALNT3Q14435 633 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 ATG9AQ7Z3C6 839 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 AMIGO1Q86WK6 493 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 DAGLBQ8NCG7 672 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 SYTL5Q8TDW5 730 aaPredicted RBP12.28□□□□□ -0.44
PCF11-201ENST00000298281 MROH8Q9H579 483 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 VPS28Q9UK41 221 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 LOC100653049A0A140TA62 436 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 SLC33A1O00400 549 aaPredicted RBP12.28□□□□□ -0.44
PCF11-201ENST00000298281 PRKAG1P54619 331 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 PRKAA2P54646 552 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 ITGA1P56199 1179 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 FMR1Q06787 632 aaKnown RBP eCLIP12.28□□□□□ -0.441e-6■■■■■ 35.7
PCF11-201ENST00000298281 ZC2HC1CQ53FD0 456 aaPredicted RBP12.28□□□□□ -0.44
PCF11-201ENST00000298281 DEFB128Q7Z7B8 93 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 NT5DC3Q86UY8 548 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 ADGRG2Q8IZP9 1017 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 CENPIQ92674 756 aaPredicted RBP12.28□□□□□ -0.44
PCF11-201ENST00000298281 PROX1Q92786 737 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 FATE1Q969F0 183 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 ZSWIM1Q9BR11 485 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 CARNS1A5YM72 827 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 PSMD11O00231 422 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 TM9SF1O15321 606 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 RGS14O43566 566 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 ICAM1P05362 532 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 NOS2P35228 1153 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 MAD2L1Q13257 205 aaPredicted RBP12.28□□□□□ -0.44
PCF11-201ENST00000298281 NFYCQ13952 458 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 ZNF655Q8N720 491 aaPredicted RBP12.28□□□□□ -0.44
PCF11-201ENST00000298281 PCSK9Q8NBP7 692 aaKnown RBP12.28□□□□□ -0.44
PCF11-201ENST00000298281 PPP1R10Q96QC0 940 aaKnown RBP12.28□□□□□ -0.44
PCF11-201ENST00000298281 PLA2R1Q13018 1463 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 PDE5AO76074 875 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 CYP2A7P20853 494 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 TBATAQ96M53 351 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 GGA3Q9NZ52 723 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 CBWD3Q5JTY5 395 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 CBWD5Q5RIA9 395 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 ZCCHC2Q9C0B9 1178 aaKnown RBP12.28□□□□□ -0.44
PCF11-201ENST00000298281 DKK3Q9UBP4 350 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 GSTK1Q9Y2Q3 226 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 CRYL1Q9Y2S2 319 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 RGS10O43665 173 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 PRLRP16471 622 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 HPCAL1P37235 193 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 BST2Q10589 180 aaKnown RBP12.28□□□□□ -0.44
PCF11-201ENST00000298281 GPAT3Q53EU6 434 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 SETMARQ53H47 684 aaPredicted RBP12.28□□□□□ -0.44
PCF11-201ENST00000298281 CWF19L1Q69YN2 538 aaKnown RBP12.28□□□□□ -0.44
PCF11-201ENST00000298281 ITIH5Q86UX2 942 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 OR52L1Q8NGH7 329 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 MIEF2Q96C03 454 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 MAGEB18Q96M61 343 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 PLAGL2Q9UPG8 496 aa12.28□□□□□ -0.44
PCF11-201ENST00000298281 MED26O95402 600 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 TCF7P36402 384 aaPredicted RBP12.27□□□□□ -0.44
PCF11-201ENST00000298281 RENBPP51606 427 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 SCARF1Q14162 830 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 SGF29Q96ES7 293 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 HIC2Q96JB3 615 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 ZIM3Q96PE6 472 aa12.27□□□□□ -0.44
PCF11-201ENST00000298281 JMJD4Q9H9V9 463 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms