RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 ICA1LQ8NDH6 482 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 ECSITQ9BQ95 431 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 MATKP42679 507 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 SDHAF4Q5VUM1 108 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 NLNQ9BYT8 704 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 PNMA8BQ9ULN7 279 aaPredicted RBP18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 ZNF839A8K0R7 811 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 PSMD12O00232 456 aaPredicted RBP18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 CPA3P15088 417 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 SP100P23497 879 aaPredicted RBP18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 HIRAP54198 1017 aaPredicted RBP18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 SMG7Q92540 1137 aaKnown RBP18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 ERP27Q96DN0 273 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 TSC22D3Q99576 134 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 H3BMM5 538 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 DAB1O75553 588 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 ECM1Q16610 540 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 BRMS1LQ5PSV4 323 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 GRIN3AQ8TCU5 1115 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 MLPHQ9BV36 600 aaPredicted RBP18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 SUFUQ9UMX1 484 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 GNG14A0A1W2PPG7 69 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 ITGB6P18564 788 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 CYP3A5P20815 502 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 CRABP2P29373 138 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 MARSP56192 900 aaKnown RBP18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 CDK16Q00536 496 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 DOK6Q6PKX4 331 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 EPS8L3Q8TE67 593 aaKnown RBP18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 PLEKHA8Q96JA3 519 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 SNRNP25Q9BV90 132 aaKnown RBP18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 DNPEPQ9ULA0 475 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 MAP3K10Q02779 954 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 XRCC4Q13426 336 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 C4orf32Q8N8J7 132 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 L2HGDHQ9H9P8 463 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 ZC4H2Q9NQZ6 224 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 ARHGAP28Q9P2N2 729 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 ADAM28Q9UKQ2 775 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 TSPAN1O60635 241 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 CYP1A2P05177 515 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 PCNAP12004 261 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 MLNP12872 115 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 DNAJC3Q13217 504 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 TDRD5Q8NAT2 981 aaKnown RBP18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 ZNF473Q8WTR7 871 aaKnown RBP18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 SHCBP1LQ9BZQ2 653 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 TUBGCP4Q9UGJ1 667 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 SCAMP3O14828 347 aaKnown RBP18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 ACLYP53396 1101 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 AGGF1Q8N302 714 aaeCLIP18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 NMRAL1Q9HBL8 299 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 TBC1D14Q9P2M4 693 aa18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 CDV3Q9UKY7 258 aaKnown RBP18.06■□□□□ 0.48
CDC42EP3-201ENST00000295324 WDR27A2RRH5 827 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 CLDN5O00501 218 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 CCNG1P51959 295 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 ANKS6Q68DC2 871 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 MAGEC3Q8TD91 643 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 LRRC39Q96DD0 335 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 THUMPD3Q9BV44 507 aaKnown RBP18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 BRD9Q9H8M2 597 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 TBX2Q13207 712 aaPredicted RBP18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 PPP1R26Q5T8A7 1209 aaPredicted RBP18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 SCARA3Q6AZY7 606 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 TTC7BQ86TV6 843 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 MRPL45Q9BRJ2 306 aaKnown RBP18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 NDEL1Q9GZM8 345 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 A0A0A0MRY4 1105 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 LOC100653049A0A140TA62 436 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 KRT34O76011 436 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 EOMESO95936 686 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 SKP1P63208 163 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 NOMO3P69849 1222 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 GALNTL6Q49A17 601 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 TRAPPC5Q8IUR0 188 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 C12orf29Q8N999 325 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 CASP10Q92851 521 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 LENG1Q96BZ8 264 aaPredicted RBP18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 SPATA13Q96N96 652 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 PDZD7Q9H5P4 517 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 ACP6Q9NPH0 428 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 MRPL42Q9Y6G3 142 aaKnown RBP18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 PSTKQ8IV42 348 aaKnown RBP18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 CHPFQ8IZ52 775 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 GGT7Q9UJ14 662 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 MYO1GB0I1T2 1018 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 STAU1O95793 577 aaKnown RBP18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 RFX8Q6ZV50 586 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 PRPF39Q86UA1 669 aaKnown RBP18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 ST6GALNAC4Q9H4F1 302 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 CACNA2D2Q9NY47 1150 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 LMO7Q8WWI1 1683 aa18.05■□□□□ 0.48
CDC42EP3-201ENST00000295324 B2RBV5 119 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 CYP1A1P04798 512 aaPredicted RBP18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 HSPA1AP0DMV8 641 aaKnown RBP18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 HSPA1BP0DMV9 641 aaKnown RBP18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 ATP4AP20648 1035 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 GPR158Q5T848 1215 aa18.04■□□□□ 0.48
CDC42EP3-201ENST00000295324 SEL1L3Q68CR1 1132 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms