RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 CPXM2Q8N436 756 aa15.6■□□□□ 0.09
CCDC140-201ENST00000295226 LRRN4Q8WUT4 740 aa15.6■□□□□ 0.09
CCDC140-201ENST00000295226 IRF7Q92985 503 aa15.6■□□□□ 0.09
CCDC140-201ENST00000295226 E2F7Q96AV8 911 aa15.6■□□□□ 0.09
CCDC140-201ENST00000295226 HAUS1Q96CS2 278 aa15.6■□□□□ 0.09
CCDC140-201ENST00000295226 FAM118BQ9BPY3 351 aa15.6■□□□□ 0.09
CCDC140-201ENST00000295226 ZNF670Q9BS34 389 aa15.6■□□□□ 0.09
CCDC140-201ENST00000295226 HPS4Q9NQG7 708 aa15.6■□□□□ 0.09
CCDC140-201ENST00000295226 SPHK2Q9NRA0 654 aa15.6■□□□□ 0.09
CCDC140-201ENST00000295226 THG1LQ9NWX6 298 aaKnown RBP15.6■□□□□ 0.09
CCDC140-201ENST00000295226 TCF20Q9UGU0 1960 aaKnown RBP15.59■□□□□ 0.09
CCDC140-201ENST00000295226 CCDC151A5D8V7 595 aa15.59■□□□□ 0.09
CCDC140-201ENST00000295226 NEDD8-MDP1E9PL57 170 aa15.59■□□□□ 0.09
CCDC140-201ENST00000295226 SLC9A3R1O14745 358 aaPredicted RBP15.59■□□□□ 0.09
CCDC140-201ENST00000295226 CST8O60676 142 aa15.59■□□□□ 0.09
CCDC140-201ENST00000295226 FGGP02679 453 aa15.59■□□□□ 0.09
CCDC140-201ENST00000295226 CYP17A1P05093 508 aa15.59■□□□□ 0.09
CCDC140-201ENST00000295226 CLCN6P51797 869 aa15.59■□□□□ 0.09
CCDC140-201ENST00000295226 MTA1Q13330 715 aa15.59■□□□□ 0.09
CCDC140-201ENST00000295226 DHCR24Q15392 516 aa15.59■□□□□ 0.09
CCDC140-201ENST00000295226 PUS10Q3MIT2 529 aaKnown RBP15.59■□□□□ 0.09
CCDC140-201ENST00000295226 C1orf228Q6PIY5 440 aa15.59■□□□□ 0.09
CCDC140-201ENST00000295226 ZDHHC14Q8IZN3 488 aa15.59■□□□□ 0.09
CCDC140-201ENST00000295226 NAT16Q8N8M0 369 aa15.59■□□□□ 0.09
CCDC140-201ENST00000295226 FAF2Q96CS3 445 aa15.59■□□□□ 0.09
CCDC140-201ENST00000295226 PBKQ96KB5 322 aa15.59■□□□□ 0.09
CCDC140-201ENST00000295226 TRMT61BQ9BVS5 477 aaKnown RBP15.59■□□□□ 0.09
CCDC140-201ENST00000295226 ZYG11BQ9C0D3 744 aa15.59■□□□□ 0.09
CCDC140-201ENST00000295226 GTSE1Q9NYZ3 720 aa15.59■□□□□ 0.09
CCDC140-201ENST00000295226 PPARGC1AQ9UBK2 798 aaKnown RBP15.59■□□□□ 0.09
CCDC140-201ENST00000295226 DCLK1O15075 740 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 TCP1P17987 556 aaKnown RBP15.58■□□□□ 0.08
CCDC140-201ENST00000295226 MCM3P25205 808 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 HOXC13P31276 330 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 HCAR3P49019 387 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 COPS2P61201 443 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 C5orf22Q49AR2 442 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 RABGAP1LQ5R372 815 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 FYB2Q5VWT5 728 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 B4GALNT4Q76KP1 1039 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 NLRP14Q86W24 1093 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 SLC13A5Q86YT5 568 aaPredicted RBP15.58■□□□□ 0.08
CCDC140-201ENST00000295226 CREG2Q8IUH2 290 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 PLCD3Q8N3E9 789 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 CARNMT1Q8N4J0 409 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 SLC44A3Q8N4M1 653 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 NPWQ8N729 165 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 OR52K2Q8NGK3 314 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 WFDC5Q8TCV5 224 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.58■□□□□ 0.08
CCDC140-201ENST00000295226 UBE2Q2Q8WVN8 375 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 CELF6Q96J87 481 aaKnown RBP15.58■□□□□ 0.08
CCDC140-201ENST00000295226 BBS2Q9BXC9 721 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 FAM50BQ9Y247 325 aa15.58■□□□□ 0.08
CCDC140-201ENST00000295226 KIF26AQ9ULI4 1882 aaPredicted RBP15.57■□□□□ 0.08
CCDC140-201ENST00000295226 PDE2AO00408 941 aaPredicted RBP15.57■□□□□ 0.08
CCDC140-201ENST00000295226 TRIM24O15164 1050 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 ERLIN1O75477 346 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 RHOQP17081 205 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 HOXD9P28356 352 aaPredicted RBP15.57■□□□□ 0.08
CCDC140-201ENST00000295226 GBE1Q04446 702 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 SLC10A2Q12908 348 aaPredicted RBP15.57■□□□□ 0.08
CCDC140-201ENST00000295226 PPP2R5EQ16537 467 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 LONRF2Q1L5Z9 754 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 MPPE1Q53F39 396 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 FSCBQ5H9T9 825 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 FAM182AQ5T1J6 154 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 NCBP2-AS2Q69YL0 99 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 PLD5Q8N7P1 536 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 HJURPQ8NCD3 748 aaPredicted RBP15.57■□□□□ 0.08
CCDC140-201ENST00000295226 DEPDC1BQ8WUY9 529 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 HNRNPLLQ8WVV9 542 aaKnown RBP15.57■□□□□ 0.08
CCDC140-201ENST00000295226 OTUB2Q96DC9 234 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 CATSPERBQ9H7T0 1116 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 ECT2Q9H8V3 914 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 RCOR3Q9P2K3 495 aaPredicted RBP15.57■□□□□ 0.08
CCDC140-201ENST00000295226 ZNF212Q9UDV6 495 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 R3HDM2Q9Y2K5 976 aaKnown RBP15.57■□□□□ 0.08
CCDC140-201ENST00000295226 HEY1Q9Y5J3 304 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 LOC730098B7Z3J9 87 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 APOL1O14791 398 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 CHADO15335 359 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 NARSO43776 548 aaKnown RBP15.57■□□□□ 0.08
CCDC140-201ENST00000295226 CYBBP04839 570 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 TYRP14679 529 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 PECAM1P16284 738 aaPredicted RBP15.57■□□□□ 0.08
CCDC140-201ENST00000295226 OR1E1P30953 314 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 CETN2P41208 172 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 PDGFRLQ15198 375 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 KCTD19Q17RG1 926 aaPredicted RBP15.57■□□□□ 0.08
CCDC140-201ENST00000295226 ACBD5Q5T8D3 534 aaPredicted RBP15.57■□□□□ 0.08
CCDC140-201ENST00000295226 NAIF1Q69YI7 327 aaPredicted RBP15.57■□□□□ 0.08
CCDC140-201ENST00000295226 SLC9A4Q6AI14 798 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 RASGEF1CQ8N431 466 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 RTL3Q8N8U3 475 aaKnown RBP15.57■□□□□ 0.08
CCDC140-201ENST00000295226 ATP2A3Q93084 1043 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 AP1M1Q9BXS5 423 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 KLC2Q9H0B6 622 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 BRD9Q9H8M2 597 aa15.57■□□□□ 0.08
CCDC140-201ENST00000295226 ARFGAP3Q9NP61 516 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms