RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 TRAF6Q9Y4K3 522 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 COL4A3BPQ9Y5P4 624 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 CCDC61Q9Y6R9 512 aa4.47□□□□□ -1.69
NCOA1-201ENST00000288599 PASKQ96RG2 1323 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 ABCB7O75027 752 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 SYNGR4O95473 234 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 FTCDO95954 541 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 APODP05090 189 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 SERPING1P05155 500 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 RARAP10276 462 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 CYP2A6P11509 494 aaPredicted RBP4.46□□□□□ -1.69
NCOA1-201ENST00000288599 MSH3P20585 1137 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 RRM1P23921 792 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 SERPINB10P48595 397 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 TAF6P49848 677 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 CRISP1P54107 249 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 TPI1P60174 286 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 ELAVL2Q12926 359 aaKnown RBP4.46□□□□□ -1.69
NCOA1-201ENST00000288599 SPIDRQ14159 915 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 PLEKHA7Q6IQ23 1121 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 C6orf120Q7Z4R8 191 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 TMEM192Q8IY95 271 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 MAGEC3Q8TD91 643 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 APPBP2Q92624 585 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 CDK5RAP1Q96SZ6 601 aaKnown RBP4.46□□□□□ -1.69
NCOA1-201ENST00000288599 HERPUD2Q9BSE4 406 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 TAPBPLQ9BX59 468 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 ZIM2Q9NZV7 527 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 PCDH10Q9P2E7 1040 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 UXTQ9UBK9 157 aaPredicted RBP4.46□□□□□ -1.69
NCOA1-201ENST00000288599 CNOT11Q9UKZ1 510 aaKnown RBP4.46□□□□□ -1.69
NCOA1-201ENST00000288599 ENTPD4Q9Y227 616 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 PPP2R2CQ9Y2T4 447 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.46□□□□□ -1.69
NCOA1-201ENST00000288599 PMF1-BGLAPU3KQ54 211 aa4.46□□□□□ -1.69
NCOA1-201ENST00000288599 EMSYQ7Z589 1322 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 IQCMA0A1B0GVH7 501 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 E2F8A0AVK6 867 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 KCNJ18B7U540 433 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 LIN7AO14910 233 aaPredicted RBP4.46□□□□□ -1.7
NCOA1-201ENST00000288599 AREL1O15033 823 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 TRIM24O15164 1050 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 TCN1P20061 433 aaPredicted RBP4.46□□□□□ -1.7
NCOA1-201ENST00000288599 AKR1D1P51857 326 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 ACTR1AP61163 376 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 TMPRSS15P98073 1019 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 PPATQ06203 517 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 EIF4A2Q14240 407 aaKnown RBP4.46□□□□□ -1.7
NCOA1-201ENST00000288599 KCNJ12Q14500 433 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 NDUFAF6Q330K2 333 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 ATXN7L2Q5T6C5 722 aaPredicted RBP4.46□□□□□ -1.7
NCOA1-201ENST00000288599 STEAP3Q658P3 488 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 BICRALQ6AI39 1079 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 DOK6Q6PKX4 331 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 GPBP1Q86WP2 473 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 ZNF555Q8NEP9 628 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 BRSK1Q8TDC3 778 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 BHMTQ93088 406 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 PDGFDQ9GZP0 370 aaPredicted RBP4.46□□□□□ -1.7
NCOA1-201ENST00000288599 SPRTNQ9H040 489 aaPredicted RBP4.46□□□□□ -1.7
NCOA1-201ENST00000288599 NANSQ9NR45 359 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 ZFP69BQ9UJL9 534 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 SLC27A6Q9Y2P4 619 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 C2CD2Q9Y426 696 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 USP17L5A8MUK1 530 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 LRRN2O75325 713 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 RHOBTB3O94955 611 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 CCNE2O96020 404 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 CYP2A7P20853 494 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 TTKP33981 857 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 TOB1P50616 345 aaPredicted RBP4.46□□□□□ -1.7
NCOA1-201ENST00000288599 PPP2CAP67775 309 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 CCZ1BP86790 482 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 CCZ1P86791 482 aaPredicted RBP4.46□□□□□ -1.7
NCOA1-201ENST00000288599 SCRN3Q0VDG4 424 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 PKP1Q13835 747 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 WDR45BQ5MNZ6 344 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 CATSPEREQ5SY80 951 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 ATPAF1Q5TC12 328 aaPredicted RBP4.46□□□□□ -1.7
NCOA1-201ENST00000288599 ACAD10Q6JQN1 1059 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 LRRC47Q8N1G4 583 aaKnown RBP4.46□□□□□ -1.7
NCOA1-201ENST00000288599 ATP6V0D2Q8N8Y2 350 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 RHPN1Q8TCX5 695 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 MYLPFQ96A32 169 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 OTUB2Q96DC9 234 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 FEM1CQ96JP0 617 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 LENG8Q96PV6 779 aaPredicted RBP4.46□□□□□ -1.7
NCOA1-201ENST00000288599 WDR11Q9BZH6 1224 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 THAP1Q9NVV9 213 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 EURLQ9NYK6 297 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 PFDN2Q9UHV9 154 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 PCDHA12Q9UN75 941 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 NPHP4O75161 1426 aaPredicted RBP4.46□□□□□ -1.7
NCOA1-201ENST00000288599 IGSF1Q8N6C5 1336 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 EXOC1LA0A1B0GW35 172 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 CPED1A4D0V7 1026 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 ZNF815PA8K554 130 aa4.46□□□□□ -1.7
NCOA1-201ENST00000288599 NKRFO15226 690 aaKnown RBP eCLIP4.46□□□□□ -1.7
NCOA1-201ENST00000288599 C21orf2O43822 256 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms