RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 AKT1P31749 480 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 CIITAP33076 1130 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 GRK5P34947 590 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 GP5P40197 560 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 PSMB10P40306 273 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 MPP3Q13368 585 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 TOP3AQ13472 1001 aaPredicted RBP4.84□□□□□ -1.63
CD44-202ENST00000278385 NFE2L1Q14494 772 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 RTP5Q14D33 572 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 MORF4L2Q15014 288 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 STILQ15468 1287 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 ARHGAP15Q53QZ3 475 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 HS1BP3Q53T59 392 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 PRAMEF14Q5SWL7 426 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 DEPDC1Q5TB30 811 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 GARNL3Q5VVW2 1013 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 LRSAM1Q6UWE0 723 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 LPCAT2Q7L5N7 544 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 ANKS1BQ7Z6G8 1248 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 METTL23Q86XA0 190 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 GATAD2AQ86YP4 633 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 SCML4Q8N228 414 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 ANKRD35Q8N283 1001 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 OR1N1Q8NGS0 311 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 OR6Y1Q8NGX8 325 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 GFM2Q969S9 779 aaKnown RBP4.84□□□□□ -1.63
CD44-202ENST00000278385 C16orf92Q96LL3 132 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 WDR24Q96S15 920 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 SPXQ9BT56 116 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 AMNQ9BXJ7 453 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 FUT8Q9BYC5 575 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 KATNBL1Q9H079 304 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 USP44Q9H0E7 712 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 MMADHCQ9H3L0 296 aaPredicted RBP4.84□□□□□ -1.63
CD44-202ENST00000278385 TAF1DQ9H5J8 278 aaPredicted RBP4.84□□□□□ -1.63
CD44-202ENST00000278385 TASP1Q9H6P5 420 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 BRF2Q9HAW0 419 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 NOD2Q9HC29 1040 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 MID1IP1Q9NPA3 183 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 PRDM8Q9NQV8 689 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 LMBRD1Q9NUN5 540 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 TAS2R3Q9NYW6 316 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 RGL1Q9NZL6 768 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 KCMF1Q9P0J7 381 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 CGNQ9P2M7 1197 aaKnown RBP4.84□□□□□ -1.63
CD44-202ENST00000278385 HOOK1Q9UJC3 728 aaKnown RBP4.84□□□□□ -1.63
CD44-202ENST00000278385 CNOT11Q9UKZ1 510 aaKnown RBP4.84□□□□□ -1.63
CD44-202ENST00000278385 VWA7Q9Y334 891 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 NR2E1Q9Y466 385 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 PCDHB1Q9Y5F3 818 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 LYVE1Q9Y5Y7 322 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 TUBGCP6Q96RT7 1819 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 SCN11AQ9UI33 1791 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 PRSS38A1L453 326 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 H0YAE9 185 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 FCHO1O14526 889 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 RRP9O43818 475 aaKnown RBP4.83□□□□□ -1.64
CD44-202ENST00000278385 NEMFO60524 1076 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 EXOC3O60645 756 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 KIF20AO95235 890 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 F9P00740 461 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 PRLP01236 227 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 ANXA1P04083 346 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 TUBB4AP04350 444 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 RPLP2P05387 115 aaKnown RBP4.83□□□□□ -1.64
CD44-202ENST00000278385 HOXB7P09629 217 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 MYL6BP14649 208 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 IL10P22301 178 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 GABRB3P28472 473 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 CSF2RBP32927 897 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 BUD31P41223 144 aaPredicted RBP4.83□□□□□ -1.64
CD44-202ENST00000278385 ASMTP46597 345 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 SULT1E1P49888 294 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 RPS16P62249 146 aaKnown RBP4.83□□□□□ -1.64
CD44-202ENST00000278385 AP2B1P63010 937 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 CDK17Q00537 523 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 CYP4A11Q02928 519 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 MALLQ13021 153 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 CBX3Q13185 183 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 LASP1Q14847 261 aaKnown RBP4.83□□□□□ -1.64
CD44-202ENST00000278385 EIF4HQ15056 248 aaKnown RBP4.83□□□□□ -1.64
CD44-202ENST00000278385 GPR68Q15743 365 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 TBCCQ15814 346 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 HLFQ16534 295 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 MAN2A1Q16706 1144 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 TTC39AQ5SRH9 613 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 CCDC183Q5T5S1 534 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 ARL6IP4Q66PJ3 421 aaKnown RBP4.83□□□□□ -1.64
CD44-202ENST00000278385 SLFN13Q68D06 897 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 OLFM4Q6UX06 510 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 ATF7IPQ6VMQ6 1270 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 GPR149Q86SP6 731 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 CIR1Q86X95 450 aaPredicted RBP4.83□□□□□ -1.64
CD44-202ENST00000278385 SCN4BQ8IWT1 228 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 ULK2Q8IYT8 1036 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 C17orf53Q8N3J3 647 aaPredicted RBP4.83□□□□□ -1.64
CD44-202ENST00000278385 TMEM57Q8N5G2 664 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 DPP10Q8N608 796 aa4.83□□□□□ -1.64
CD44-202ENST00000278385 TDRD5Q8NAT2 981 aaKnown RBP4.83□□□□□ -1.64
CD44-202ENST00000278385 LINS1Q8NG48 757 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms