RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 TEX9Q8N6V9 391 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 TNIP2Q8NFZ5 429 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 OR52K1Q8NGK4 314 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 CYGBQ8WWM9 190 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 ABTB1Q969K4 478 aaPredicted RBP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 HES6Q96HZ4 224 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 ACOX2Q99424 681 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 IL22Q9GZX6 179 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 NEUROG2Q9H2A3 272 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 STN1Q9H668 368 aaKnown RBP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 WDR41Q9HAD4 459 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 GOLGA2P5Q9HBQ8 144 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 BLOC1S6Q9UL45 172 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 NR2E3Q9Y5X4 410 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 MGAT4DA6NG13 374 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 NT5C1B-RDH14C9J2C7 533 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 NFKBIEO00221 500 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 GUCA1CO95843 209 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 ATP4AP20648 1035 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 MAPK1P28482 360 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 GPC1P35052 558 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 GRK3P35626 688 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 CLK2P49760 499 aaKnown RBP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 CORO7P57737 925 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 POLR2LP62875 67 aaKnown RBP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 CDC16Q13042 620 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 CYLC2Q14093 348 aaPredicted RBP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 CCDC153Q494R4 210 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 SDHAF4Q5VUM1 108 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 C9orf57Q5W0N0 161 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 ZNF670Q9BS34 389 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 MAF1Q9H063 256 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 ST6GALNAC4Q9H4F1 302 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 LRRC19Q9H756 370 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 TCF7L2Q9NQB0 619 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 ZNF214Q9UL59 606 aaPredicted RBP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 DTNAQ9Y4J8 743 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 GNG14A0A1W2PPG7 69 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 SOWAHBA6NEL2 793 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 C16orf96A6NNT2 1141 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 IFRD1O00458 451 aaPredicted RBP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 DUSP11O75319 330 aaKnown RBP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 KRT6AP02538 564 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 KRT6BP04259 564 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 MMP8P22894 467 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 KRT6CP48668 564 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 MRPS5P82675 430 aaKnown RBP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 TP53BP2Q13625 1128 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 AGKQ53H12 422 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 TSHZ1Q6ZSZ6 1077 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 TRMT11Q7Z4G4 463 aaKnown RBP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 CACUL1Q86Y37 369 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 MRPL45Q9BRJ2 306 aaKnown RBP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 DUSP16Q9BY84 665 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 ZCCHC2Q9C0B9 1178 aaKnown RBP11.5□□□□□ -0.57
USP6NL-201ENST00000277575 SUFUQ9UMX1 484 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 DERAQ9Y315 318 aa11.5□□□□□ -0.57
USP6NL-201ENST00000277575 MON2Q7Z3U7 1717 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 UBDO15205 165 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 CHADO15335 359 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 UBOX5O94941 541 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 ACADMP11310 421 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 GOT1P17174 413 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 HOXB8P17481 243 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-201ENST00000277575 CALB2P22676 271 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 SERPINA4P29622 427 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 TAS2R40P59535 323 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 ILF2Q12905 390 aaKnown RBP11.49□□□□□ -0.57
USP6NL-201ENST00000277575 HORMAD1Q86X24 394 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 SYTL1Q8IYJ3 562 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 ZNF557Q8N988 423 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-201ENST00000277575 ALG3Q92685 438 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 PLEKHA8Q96JA3 519 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 IGFLR1Q9H665 355 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 NMRAL1Q9HBL8 299 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 FSCN2O14926 492 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 TBC1D4O60343 1298 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 CST3P01034 146 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-201ENST00000277575 CYP1A1P04798 512 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-201ENST00000277575 ERVK-10P10266 1014 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 NFYCQ13952 458 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 PSMD5Q16401 504 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 DDR2Q16832 855 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 PTPN20Q4JDL3 420 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 ATP6AP1LQ52LC2 224 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 ACBD5Q5T8D3 534 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-201ENST00000277575 DSG4Q86SJ6 1040 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 SLC44A2Q8IWA5 706 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-201ENST00000277575 FIBCD1Q8N539 461 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 ZFP42Q96MM3 310 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 ZYG11BQ9C0D3 744 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 COPS7BQ9H9Q2 264 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-201ENST00000277575 TUBGCP4Q9UGJ1 667 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 CRYL1Q9Y2S2 319 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 hCG_1818297A0A087WSY0 165 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 A8MX80 341 aa11.49□□□□□ -0.57
USP6NL-201ENST00000277575 XPO1O14980 1071 aaKnown RBP11.49□□□□□ -0.57
USP6NL-201ENST00000277575 CCNT2O60583 730 aaKnown RBP11.49□□□□□ -0.57
USP6NL-201ENST00000277575 CCNB1P14635 433 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms