RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 CCDC130P13994 396 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 CPB1P15086 417 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 AKAP5P24588 427 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 HADHBP55084 474 aaKnown RBP11.79□□□□□ -0.52
VPS33A-201ENST00000267199 PAN2Q504Q3 1202 aaKnown RBP11.79□□□□□ -0.52
VPS33A-201ENST00000267199 AGAP9Q5VTM2 703 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 NAT14Q8WUY8 206 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 CDT1Q9H211 546 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 SETD4Q9NVD3 440 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 ETNK2Q9NVF9 386 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 SPATA31C2B4DYI2 1134 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 F8W8V4 182 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 RNF103O00237 685 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 MAP3K7CLP57077 242 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 DEFA1P59665 94 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 DEFA3P59666 94 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 ADIGQ0VDE8 80 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 PTPN20Q4JDL3 420 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 TMC5Q6UXY8 1006 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 PQLC1Q8N2U9 271 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 RNF157Q96PX1 679 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 SLC38A7Q9NVC3 462 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 CCL15-CCL14A0A0B4J2E2 113 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 B4GALT5O43286 388 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 B3GAT3O94766 335 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 DDHD2O94830 711 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 PSMB9P28065 219 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 ADSSP30520 456 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 ZNF143P52747 638 aaPredicted RBP11.79□□□□□ -0.52
VPS33A-201ENST00000267199 CCL15Q16663 113 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 CYP51A1Q16850 503 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 VWA5B1Q5TIE3 1220 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 LINC00523Q86TU6 105 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 STK32CQ86UX6 486 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 DEFB106AQ8N104 65 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 OR9Q1Q8NGQ5 310 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 ADAM32Q8TC27 787 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 ACO2Q99798 780 aaKnown RBP11.79□□□□□ -0.52
VPS33A-201ENST00000267199 MROH8Q9H579 483 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 POLR1BQ9H9Y6 1135 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 CACYBPQ9HB71 228 aaKnown RBP11.79□□□□□ -0.52
VPS33A-201ENST00000267199 TJP2Q9UDY2 1190 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 PRKAG3Q9UGI9 489 aa11.79□□□□□ -0.52
VPS33A-201ENST00000267199 NFASCO94856 1347 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 ATP6V1G1O75348 118 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 GRIA3P42263 894 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 MMP14P50281 582 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 GPR107Q5VW38 600 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 ANKRD22Q5VYY1 191 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 CATSPERGQ6ZRH7 1159 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 DHRSXQ8N5I4 330 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 EFHBQ8N7U6 833 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 TNIP2Q8NFZ5 429 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 CALML6Q8TD86 181 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 SLC2A14Q8TDB8 520 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 ERLEC1Q96DZ1 483 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 TUBGCP5Q96RT8 1024 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 ROGDIQ9GZN7 287 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 WDR55Q9H6Y2 383 aaPredicted RBP11.78□□□□□ -0.52
VPS33A-201ENST00000267199 CATSPERBQ9H7T0 1116 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 MRGBPQ9NV56 204 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 CD274Q9NZQ7 290 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 RSL24D1Q9UHA3 163 aaKnown RBP11.78□□□□□ -0.52
VPS33A-201ENST00000267199 SYNDIG1LA6NDD5 238 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 YDJCA8MPS7 323 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 CFAP99D6REC4 459 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 SLCO1B7G3V0H7 640 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 PLSCR1O15162 318 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 MAP3K13O43283 966 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 NDUFS3O75489 264 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 ANXA9O76027 345 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 TRUB2O95900 331 aaKnown RBP11.78□□□□□ -0.52
VPS33A-201ENST00000267199 C4BPAP04003 597 aaKnown RBP11.78□□□□□ -0.52
VPS33A-201ENST00000267199 XPAP23025 273 aaPredicted RBP11.78□□□□□ -0.52
VPS33A-201ENST00000267199 TKTL1P51854 596 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 CNPY1Q3B7I2 92 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 ZIK1Q3SY52 487 aaPredicted RBP11.78□□□□□ -0.52
VPS33A-201ENST00000267199 RALGPS1Q5JS13 557 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 MON1BQ7L1V2 547 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 CMC1Q7Z7K0 106 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 APBB2Q92870 758 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 CELF6Q96J87 481 aaKnown RBP11.78□□□□□ -0.52
VPS33A-201ENST00000267199 RNF145Q96MT1 663 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 PLEKHG4BQ96PX9 1271 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 APBA2Q99767 749 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 SNRNP25Q9BV90 132 aaKnown RBP11.78□□□□□ -0.52
VPS33A-201ENST00000267199 SLC4A5Q9BY07 1137 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 ATXN3LQ9H3M9 355 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 RERGLQ9H628 205 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 GPAMQ9HCL2 828 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 ARHGAP28Q9P2N2 729 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 TRDMT1O14717 391 aaKnown RBP11.78□□□□□ -0.52
VPS33A-201ENST00000267199 MAFO75444 373 aaPredicted RBP11.78□□□□□ -0.52
VPS33A-201ENST00000267199 MYCP01106 439 aaPredicted RBP11.78□□□□□ -0.52
VPS33A-201ENST00000267199 PPARGP37231 505 aaPredicted RBP11.78□□□□□ -0.52
VPS33A-201ENST00000267199 YWHAZP63104 245 aaKnown RBP11.78□□□□□ -0.52
VPS33A-201ENST00000267199 CDC16Q13042 620 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 ABHD15Q6UXT9 468 aa11.78□□□□□ -0.52
VPS33A-201ENST00000267199 MAGEE2Q8TD90 523 aaPredicted RBP11.78□□□□□ -0.52
VPS33A-201ENST00000267199 DCUN1D1Q96GG9 259 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms