RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 FAM228AQ86W67 206 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 EMC1Q8N766 993 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 PLD5Q8N7P1 536 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 TSGA13Q96PP4 275 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 MKS1Q9NXB0 559 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 SUN2Q9UH99 717 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 DNPEPQ9ULA0 475 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 AMHP03971 560 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 ACADMP11310 421 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 HLA-DPA1P20036 260 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 CCNCP24863 283 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 BEX3Q00994 111 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 STXBP5Q5T5C0 1151 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 FUKQ8N0W3 1084 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 KLHDC9Q8NEP7 349 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 VMP1Q96GC9 406 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 MAGEB18Q96M61 343 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 ANKRD27Q96NW4 1050 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 IKZF4Q9H2S9 585 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 ABHD14A-ACY1A0A1B0GW23 586 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 GLUD2P49448 558 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 TMEM62Q0P6H9 643 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 ARHGEF7Q14155 803 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 USP41Q3LFD5 358 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 PAN2Q504Q3 1202 aaKnown RBP8.43□□□□□ -1.06
PTPN3-201ENST00000262539 MARCH8Q5T0T0 291 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 PPP1R26Q5T8A7 1209 aaPredicted RBP8.43□□□□□ -1.06
PTPN3-201ENST00000262539 CYP4A22Q5TCH4 519 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 CHCHD4Q8N4Q1 142 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 BCAS3Q9H6U6 928 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 GTSE1Q9NYZ3 720 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 FANCGO15287 622 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 GPR32O75388 356 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 SERPINB5P36952 375 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 MARCKSL1P49006 195 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 HARS2P49590 506 aaKnown RBP8.43□□□□□ -1.06
PTPN3-201ENST00000262539 ATP1A2P50993 1020 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 PKN2Q16513 984 aaKnown RBP8.43□□□□□ -1.06
PTPN3-201ENST00000262539 GLRA4Q5JXX5 417 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 KDELC2Q7Z4H8 507 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 PPHLN1Q8NEY8 458 aaKnown RBP8.43□□□□□ -1.06
PTPN3-201ENST00000262539 ZNF558Q96NG5 402 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 USP15Q9Y4E8 981 aaPredicted RBP8.43□□□□□ -1.06
PTPN3-201ENST00000262539 TAF1P21675 1872 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 FAM155BO75949 473 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 SSTR3P32745 418 aaPredicted RBP8.42□□□□□ -1.06
PTPN3-201ENST00000262539 ADIGQ0VDE8 80 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 KCNT2Q6UVM3 1135 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 RGS9BPQ6ZS82 235 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 C11orf96Q7Z7L8 435 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 TTC8Q8TAM2 541 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 RDH11Q8TC12 318 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 POP5Q969H6 163 aaKnown RBP8.42□□□□□ -1.06
PTPN3-201ENST00000262539 FOPNLQ96NB1 174 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 EBNA1BP2Q99848 306 aaKnown RBP8.42□□□□□ -1.06
PTPN3-201ENST00000262539 PTPN18Q99952 460 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 ALDH1A2O94788 518 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 DDX5P17844 614 aaKnown RBP8.42□□□□□ -1.06
PTPN3-201ENST00000262539 CLNS1AP54105 237 aaKnown RBP8.42□□□□□ -1.06
PTPN3-201ENST00000262539 PAFAH1B3Q15102 231 aaKnown RBP8.42□□□□□ -1.06
PTPN3-201ENST00000262539 UBXN11Q5T124 520 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 GJC2Q5T442 439 aaPredicted RBP8.42□□□□□ -1.06
PTPN3-201ENST00000262539 FBXW10Q5XX13 1052 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 RFX8Q6ZV50 586 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 JOSD2Q8TAC2 188 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 BTN2A3PQ96KV6 586 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 CSPG4P5Q96PW8 444 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 RGS18Q9NS28 235 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 DCDC2Q9UHG0 476 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 SLC25A13Q9UJS0 675 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 MTO1Q9Y2Z2 717 aaKnown RBP8.42□□□□□ -1.06
PTPN3-201ENST00000262539 TMEM120BA0PK00 339 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 SKIV2L2P42285 1042 aaKnown RBP8.42□□□□□ -1.06
PTPN3-201ENST00000262539 MAGEA9P43362 315 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 FAM189BP81408 668 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 MSANTD2Q6P1R3 559 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 RRM2BQ7LG56 351 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 FAM131BQ86XD5 332 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 MRPS31Q92665 395 aaKnown RBP8.42□□□□□ -1.06
PTPN3-201ENST00000262539 FATE1Q969F0 183 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 ZNF512Q96ME7 567 aaPredicted RBP8.42□□□□□ -1.06
PTPN3-201ENST00000262539 ASB2Q96Q27 587 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 YME1L1Q96TA2 773 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 HEATR9A2RTY3 570 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 WDR91A4D1P6 747 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 APRTP07741 180 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 APLP1P51693 650 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 C16orf72Q14CZ0 275 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 SLC14A2Q15849 920 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 FSCBQ5H9T9 825 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 LRRC8EQ6NSJ5 796 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 SPATA21Q7Z572 469 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 MPP5Q8N3R9 675 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 FBXO32Q969P5 355 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 RIMKLBQ9ULI2 386 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 EPOP01588 193 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 LIG3P49916 1009 aa8.42□□□□□ -1.06
PTPN3-201ENST00000262539 ATN1P54259 1190 aaPredicted RBP8.42□□□□□ -1.06
PTPN3-201ENST00000262539 RFTN1Q14699 578 aaPredicted RBP8.42□□□□□ -1.06
PTPN3-201ENST00000262539 KCNA10Q16322 511 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms