RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 ANKS1BQ7Z6G8 1248 aa17.3■□□□□ 0.36
SDCBP-201ENST00000260130 MFN1Q8IWA4 741 aa17.3■□□□□ 0.36
SDCBP-201ENST00000260130 TXLNBQ8N3L3 684 aa17.3■□□□□ 0.36
SDCBP-201ENST00000260130 ACRBPQ8NEB7 543 aa17.3■□□□□ 0.36
SDCBP-201ENST00000260130 THAP2Q9H0W7 228 aa17.3■□□□□ 0.36
SDCBP-201ENST00000260130 PRMT8Q9NR22 394 aaPredicted RBP17.3■□□□□ 0.36
SDCBP-201ENST00000260130 TMPRSS4Q9NRS4 437 aa17.3■□□□□ 0.36
SDCBP-201ENST00000260130 C2orf42Q9NWW7 574 aa17.3■□□□□ 0.36
SDCBP-201ENST00000260130 RAB21Q9UL25 225 aa17.3■□□□□ 0.36
SDCBP-201ENST00000260130 VANGL2Q9ULK5 521 aa17.3■□□□□ 0.36
SDCBP-201ENST00000260130 DESP17661 470 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 HLA-FP30511 346 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 PTPN5P54829 565 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 OGDHQ02218 1023 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 TTC39BQ5VTQ0 682 aaPredicted RBP17.29■□□□□ 0.36
SDCBP-201ENST00000260130 CCDC117Q8IWD4 279 aaPredicted RBP17.29■□□□□ 0.36
SDCBP-201ENST00000260130 FIBINQ8TAL6 211 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 ACDQ96AP0 544 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 RPRD1AQ96P16 312 aaPredicted RBP17.29■□□□□ 0.36
SDCBP-201ENST00000260130 ARIH1Q9Y4X5 557 aaPredicted RBP17.29■□□□□ 0.36
SDCBP-201ENST00000260130 A0A0U1RQJ8 604 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 CHRM1P11229 460 aaPredicted RBP17.29■□□□□ 0.36
SDCBP-201ENST00000260130 ADRA1BP35368 520 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 GGCXP38435 758 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 GALCP54803 685 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 CSTF1Q05048 431 aaKnown RBP17.29■□□□□ 0.36
SDCBP-201ENST00000260130 HSF5Q4G112 596 aaPredicted RBP17.29■□□□□ 0.36
SDCBP-201ENST00000260130 SYT13Q7L8C5 426 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 C14orf80Q86SX3 495 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 CARNMT1Q8N4J0 409 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 ALLCQ8N6M5 410 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 ZNF513Q8N8E2 541 aaPredicted RBP17.29■□□□□ 0.36
SDCBP-201ENST00000260130 IL17RCQ8NAC3 791 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 WFDC5Q8TCV5 224 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 ATRIPQ8WXE1 791 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 IGSF8Q969P0 613 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 IRF2BPLQ9H1B7 796 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 ANKZF1Q9H8Y5 726 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 ABCB8Q9NUT2 735 aa17.29■□□□□ 0.36
SDCBP-201ENST00000260130 KIAA1549LQ6ZVL6 1849 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 CTAGE15A4D2H0 777 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 MAP2K7O14733 419 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 LUC7L3O95232 432 aaKnown RBP17.28■□□□□ 0.36
SDCBP-201ENST00000260130 PAPSS2O95340 614 aaPredicted RBP17.28■□□□□ 0.36
SDCBP-201ENST00000260130 CTAGE8P0CG41 777 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 PSMA2P25787 234 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 CDH18Q13634 790 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 C5orf22Q49AR2 442 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 TSSK4Q6SA08 328 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 LRRC31Q6UY01 552 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 KIAA0907Q7Z7F0 614 aaPredicted RBP17.28■□□□□ 0.36
SDCBP-201ENST00000260130 CTAGE6Q86UF2 777 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 CTAGE4Q8IX94 777 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 CCDC33Q8N5R6 958 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.28■□□□□ 0.36
SDCBP-201ENST00000260130 FNIP1Q8TF40 1166 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 HCN2Q9UL51 889 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 H0Y626 953 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 TIMM44O43615 452 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 SP9P0CG40 484 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 SCYL2Q6P3W7 929 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 HDXQ7Z353 690 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 TXNDC5Q8NBS9 432 aaKnown RBP17.28■□□□□ 0.36
SDCBP-201ENST00000260130 TRIM7Q9C029 511 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 ZDHHC4Q9NPG8 344 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 POLR3BQ9NW08 1133 aaPredicted RBP17.28■□□□□ 0.36
SDCBP-201ENST00000260130 ELOVL2Q9NXB9 296 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 GGA2Q9UJY4 613 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 SLC8A2Q9UPR5 921 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 SNX10Q9Y5X0 201 aa17.28■□□□□ 0.36
SDCBP-201ENST00000260130 A0A1B0GVM2 712 aa17.27■□□□□ 0.36
SDCBP-201ENST00000260130 TCAF2A6NFQ2 919 aa17.27■□□□□ 0.36
SDCBP-201ENST00000260130 KLF8O95600 359 aaPredicted RBP17.27■□□□□ 0.36
SDCBP-201ENST00000260130 CYP1A2P05177 515 aa17.27■□□□□ 0.36
SDCBP-201ENST00000260130 PABPC1P11940 636 aaKnown RBP17.27■□□□□ 0.36
SDCBP-201ENST00000260130 CD70P32970 193 aa17.27■□□□□ 0.36
SDCBP-201ENST00000260130 ARHGAP25P42331 645 aa17.27■□□□□ 0.36
SDCBP-201ENST00000260130 EIF4HQ15056 248 aaKnown RBP17.27■□□□□ 0.36
SDCBP-201ENST00000260130 ZNF528Q3MIS6 628 aa17.27■□□□□ 0.36
SDCBP-201ENST00000260130 FSCBQ5H9T9 825 aa17.27■□□□□ 0.36
SDCBP-201ENST00000260130 EGFLAMQ63HQ2 1017 aa17.27■□□□□ 0.36
SDCBP-201ENST00000260130 TMEM215Q68D42 235 aa17.27■□□□□ 0.36
SDCBP-201ENST00000260130 TRMT11Q7Z4G4 463 aaKnown RBP17.27■□□□□ 0.36
SDCBP-201ENST00000260130 ZNF683Q8IZ20 524 aa17.27■□□□□ 0.36
SDCBP-201ENST00000260130 CCDC185Q8N715 623 aa17.27■□□□□ 0.36
SDCBP-201ENST00000260130 WFIKKN2Q8TEU8 576 aa17.27■□□□□ 0.36
SDCBP-201ENST00000260130 NTAN1Q96AB6 310 aa17.27■□□□□ 0.36
SDCBP-201ENST00000260130 MMP17Q9ULZ9 603 aa17.27■□□□□ 0.36
SDCBP-201ENST00000260130 EPN1Q9Y6I3 576 aaPredicted RBP17.27■□□□□ 0.36
SDCBP-201ENST00000260130 DRGXA6NNA5 263 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 DMC1Q14565 340 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 SLFN11Q7Z7L1 901 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 CIR1Q86X95 450 aaPredicted RBP17.26■□□□□ 0.35
SDCBP-201ENST00000260130 AHI1Q8N157 1196 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 UCMAQ8WVF2 138 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 ARHGEF26Q96DR7 871 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 LMLNQ96KR4 655 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 CIPCQ9C0C6 399 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 OSBPL2Q9H1P3 480 aa17.26■□□□□ 0.35
SDCBP-201ENST00000260130 KIAA1522Q9P206 1035 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms