RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 MBOAT7Q96N66 472 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 FIS1Q9Y3D6 152 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 FAM32AQ9Y421 112 aaKnown RBP13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 A0A1B0GVM2 712 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 TCAF2A6NFQ2 919 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 ANKRD63C9JTQ0 380 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 FPGTO14772 594 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 INPPL1O15357 1258 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 FGF1P05230 155 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 GPD2P43304 727 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 TTPAP49638 278 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 AP2B1P63010 937 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 ZNF544Q6NX49 715 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 HTR3CQ8WXA8 447 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 HERVK_113Q902F9 699 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 SGSM3Q96HU1 749 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 SERAC1Q96JX3 654 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 DNAJC1Q96KC8 554 aaKnown RBP13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 MRTO4Q9UKD2 239 aaKnown RBP13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 TTC7AQ9ULT0 858 aaPredicted RBP13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 SCN11AQ9UI33 1791 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 DTNBO60941 627 aa13.71□□□□□ -0.22
PRPF38A-201ENST00000257181 SRSF11Q05519 484 aaKnown RBP13.71□□□□□ -0.22
PRPF38A-201ENST00000257181 GABPB1Q06547 395 aaPredicted RBP13.71□□□□□ -0.22
PRPF38A-201ENST00000257181 TMEM192Q8IY95 271 aa13.71□□□□□ -0.22
PRPF38A-201ENST00000257181 TRIML2Q8N7C3 387 aa13.71□□□□□ -0.22
PRPF38A-201ENST00000257181 COLGALT1Q8NBJ5 622 aa13.71□□□□□ -0.22
PRPF38A-201ENST00000257181 BRSK1Q8TDC3 778 aa13.71□□□□□ -0.22
PRPF38A-201ENST00000257181 EDEM1Q92611 657 aa13.71□□□□□ -0.22
PRPF38A-201ENST00000257181 RBM15Q96T37 977 aaKnown RBP eCLIP13.71□□□□□ -0.22
PRPF38A-201ENST00000257181 APOL5Q9BWW9 433 aa13.71□□□□□ -0.22
PRPF38A-201ENST00000257181 ZNF711Q9Y462 761 aa13.71□□□□□ -0.22
PRPF38A-201ENST00000257181 CFLARO15519 480 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 TEX33O43247 280 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 MGEA5O60502 916 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 ATP9AO75110 1047 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 JCHAINP01591 159 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 TPBGLP0DKB5 382 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 HPGDP15428 266 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 COILP38432 576 aaPredicted RBP13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 LCLAT1Q6UWP7 414 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 STX19Q8N4C7 294 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 TTC29Q8NA56 475 aaPredicted RBP13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 SLC35C1Q96A29 364 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 TASP1Q9H6P5 420 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 PRR5-ARHGAP8B1AHC4 643 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 F8VP50 259 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 ANGPT2O15123 496 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 POP4O95707 220 aaKnown RBP13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 PGAM1P18669 254 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 FBXO43Q4G163 708 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 SPDYAQ5MJ70 313 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 PIGZQ86VD9 579 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 CLYBLQ8N0X4 340 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 SH3GL1Q99961 368 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 NXF3Q9H4D5 531 aaKnown RBP13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 NEMP2A6NFY4 417 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 IL1BP01584 269 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 ACRP10323 421 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 SKIV2L2P42285 1042 aaKnown RBP13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 CCL14Q16627 93 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 GRTP1Q5TC63 336 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 COG1Q8WTW3 980 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 RERGQ96A58 199 aaPredicted RBP13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 OR12D3Q9UGF7 316 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 KCNE1P15382 129 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 CXCR5P32302 372 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 MAP3K10Q02779 954 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 ZNF211Q13398 564 aaPredicted RBP13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 SYTL1Q8IYJ3 562 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 NKAPQ8N5F7 415 aaKnown RBP13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 ZSCAN1Q8NBB4 408 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 FBXL18Q96ME1 805 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 RPS6KB2Q9UBS0 482 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 TM9SF1O15321 606 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 ACSL4O60488 711 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 CLK2P49760 499 aaKnown RBP13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 SERPINH1P50454 418 aaKnown RBP13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 DUSP4Q13115 394 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 CCDC38Q502W7 563 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 RAET1GQ6H3X3 334 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 TCAIMQ8N3R3 496 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 ANGPTL2Q9UKU9 493 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 PCDHA3Q9Y5H8 950 aa13.7□□□□□ -0.22
PRPF38A-201ENST00000257181 A0A087X1B8 175 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 FAM107AO95990 144 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 RRP1BQ14684 758 aaKnown RBP13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 TARBP2Q15633 366 aaKnown RBP13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 ZFP28Q8NHY6 868 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 HAPLN3Q96S86 360 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 EPC1Q9H2F5 836 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 SOHLH2Q9NX45 425 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 ELOVL2Q9NXB9 296 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 TMEM114B3SHH9 223 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 CHGBP05060 677 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 CASP4P49662 377 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 FMR1Q06787 632 aaKnown RBP eCLIP13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 MGAT5Q09328 741 aa13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 ILF3Q12906 894 aaKnown RBP eCLIP13.69□□□□□ -0.22
PRPF38A-201ENST00000257181 GDF6Q6KF10 455 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms