RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 ECEL1O95672 775 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 GJA1P17302 382 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 CEBPBP17676 345 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 MCM3P25205 808 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 ETFBP38117 255 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 DRG2P55039 364 aaKnown RBP13.31□□□□□ -0.28
LSM8-201ENST00000249299 NTHL1P78549 312 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 ZXDBP98169 803 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 ZNF77Q15935 545 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 STXBP5Q5T5C0 1151 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 AFMIDQ63HM1 303 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 RAP1GAP2Q684P5 730 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 C8orf74Q6P047 294 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 C4orf22Q6V702 233 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 ZNF783Q6ZMS7 281 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 C14orf80Q86SX3 495 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 SETD3Q86TU7 594 aaPredicted RBP13.31□□□□□ -0.28
LSM8-201ENST00000249299 CCDC105Q8IYK2 499 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 GPR161Q8N6U8 529 aaKnown RBP13.31□□□□□ -0.28
LSM8-201ENST00000249299 EIF1ADQ8N9N8 165 aaKnown RBP13.31□□□□□ -0.28
LSM8-201ENST00000249299 HJURPQ8NCD3 748 aaPredicted RBP13.31□□□□□ -0.28
LSM8-201ENST00000249299 SMRP1Q8NCR6 262 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 ITFG1Q8TB96 612 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 ZSCAN18Q8TBC5 510 aaPredicted RBP13.31□□□□□ -0.28
LSM8-201ENST00000249299 FGF13Q92913 245 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 RTP4Q96DX8 246 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 RPRD1AQ96P16 312 aaPredicted RBP13.31□□□□□ -0.28
LSM8-201ENST00000249299 TSGA13Q96PP4 275 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 KRT12Q99456 494 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 MAGEB5Q9BZ81 275 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 FAM129AQ9BZQ8 928 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 VANGL2Q9ULK5 521 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 R3HDM2Q9Y2K5 976 aaKnown RBP13.31□□□□□ -0.28
LSM8-201ENST00000249299 TRIOBPQ9H2D6 2365 aa13.31□□□□□ -0.28
LSM8-201ENST00000249299 TBX10O75333 385 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 RBP3P10745 1247 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 LTBRP36941 435 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 EIF3EP60228 445 aaKnown RBP13.3□□□□□ -0.28
LSM8-201ENST00000249299 DYNLT1P63172 113 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 DR1Q01658 176 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 C2orf54Q08AI8 447 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 GALNT2Q10471 571 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 PARP15Q460N3 678 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 MPPE1Q53F39 396 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 SLC45A4Q5BKX6 768 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 ADAT2Q7Z6V5 191 aaKnown RBP13.3□□□□□ -0.28
LSM8-201ENST00000249299 CDKL3Q8IVW4 592 aaPredicted RBP13.3□□□□□ -0.28
LSM8-201ENST00000249299 LGI2Q8N0V4 545 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 CCDC89Q8N998 374 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 NOA1Q8NC60 698 aaKnown RBP13.3□□□□□ -0.28
LSM8-201ENST00000249299 C1orf54Q8WWF1 131 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 HDAC11Q96DB2 347 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 TMA16Q96EY4 203 aaKnown RBP13.3□□□□□ -0.28
LSM8-201ENST00000249299 ASB16Q96NS5 453 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 KLC2Q9H0B6 622 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 DDX47Q9H0S4 455 aaKnown RBP13.3□□□□□ -0.28
LSM8-201ENST00000249299 RAB17Q9H0T7 212 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 CLDND1Q9NY35 253 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 ZNF212Q9UDV6 495 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 DNPEPQ9ULA0 475 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 TBC1D30Q9Y2I9 924 aa13.3□□□□□ -0.28
LSM8-201ENST00000249299 ILVBLA1L0T0 632 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 SOX1O00570 391 aaPredicted RBP13.29□□□□□ -0.28
LSM8-201ENST00000249299 NRG2O14511 850 aaPredicted RBP13.29□□□□□ -0.28
LSM8-201ENST00000249299 CYBBP04839 570 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 PECAM1P16284 738 aaPredicted RBP13.29□□□□□ -0.28
LSM8-201ENST00000249299 IGFBP4P22692 258 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 SLC6A4P31645 630 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 GBE1Q04446 702 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 LLGL1Q15334 1064 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 C6orf118Q5T5N4 469 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 TIGD7Q6NT04 549 aaPredicted RBP13.29□□□□□ -0.28
LSM8-201ENST00000249299 KLHL7Q8IXQ5 586 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 ALLCQ8N6M5 410 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 TFB1MQ8WVM0 346 aaKnown RBP13.29□□□□□ -0.28
LSM8-201ENST00000249299 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.29□□□□□ -0.28
LSM8-201ENST00000249299 SEC14L1Q92503 715 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 SUSD6Q92537 303 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 IGSF8Q969P0 613 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 QKIQ96PU8 341 aaKnown RBP eCLIP13.29□□□□□ -0.28
LSM8-201ENST00000249299 VAT1Q99536 393 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 MAGEH1Q9H213 219 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 ETNK2Q9NVF9 386 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 AMACRQ9UHK6 382 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 ZNF148Q9UQR1 794 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 UTP11Q9Y3A2 253 aaKnown RBP13.29□□□□□ -0.28
LSM8-201ENST00000249299 HEY1Q9Y5J3 304 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 SNX10Q9Y5X0 201 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 ANAPC1Q9H1A4 1944 aa13.29□□□□□ -0.28
LSM8-201ENST00000249299 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.28□□□□□ -0.28
LSM8-201ENST00000249299 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.28□□□□□ -0.28
LSM8-201ENST00000249299 ARHGAP42A6NI28 874 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 MFSD11O43934 449 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 IRF1P10914 325 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 CCNCP24863 283 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 OR1E1P30953 314 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 GARSP41250 739 aaKnown RBP13.28□□□□□ -0.28
LSM8-201ENST00000249299 PTGIRP43119 386 aa13.28□□□□□ -0.28
LSM8-201ENST00000249299 PPIDQ08752 370 aaKnown RBP13.28□□□□□ -0.28
LSM8-201ENST00000249299 SLC10A2Q12908 348 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms