RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ZBTB24O43167 697 aaPredicted RBP20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 PLIN3O60664 434 aa20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 LYPLA1O75608 230 aaPredicted RBP20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 KCNA4P22459 653 aa20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 CD68P34810 354 aaPredicted RBP20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 ZNF778Q96MU6 729 aa20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 EBF4Q9BQW3 602 aa20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 COLEC11Q9BWP8 271 aa20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 WWP1Q9H0M0 922 aa20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 ARL5CA6NH57 179 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 H0Y3Z8 333 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 AP2A1O95782 977 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 F7P08709 466 aaPredicted RBP20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 CTSHP09668 335 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 CPA2P48052 419 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 HCAR3P49019 387 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 SCNN1GP51170 649 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 PDE1BQ01064 536 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 CDK18Q07002 472 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 ZBTB17Q13105 803 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 PCLAFQ15004 111 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 SPANXN3Q5MJ09 141 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 ATG14Q6ZNE5 492 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 IGHA2P01877 340 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 C6orf222P0C671 652 aaPredicted RBP20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 KHDC1Q4VXA5 237 aaKnown RBP20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 TIGD5Q53EQ6 642 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 TEDDM1Q5T9Z0 273 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 KCTD11Q693B1 232 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 AGMOQ6ZNB7 445 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 PDZD4Q76G19 769 aaPredicted RBP20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 FBXO27Q8NI29 283 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 RSRC1Q96IZ7 334 aaKnown RBP20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 RTP3Q9BQQ7 232 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 MLPHQ9BV36 600 aaPredicted RBP20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 DCDC2Q9UHG0 476 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 CDH9Q9ULB4 789 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 TRPV2Q9Y5S1 764 aa20.01■□□□□ 0.79
CDC42EP1-201ENST00000249014 E2F8A0AVK6 867 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 M0QZ92 97 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 CHRNA1P02708 482 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 ENO1P06733 434 aaKnown RBP20■□□□□ 0.79
CDC42EP1-201ENST00000249014 GP5P40197 560 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 TAF1CQ15572 869 aaPredicted RBP20■□□□□ 0.79
CDC42EP1-201ENST00000249014 GPATCH11Q8N954 259 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 PPP1R14CQ8TAE6 165 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 SH3TC2Q8TF17 1288 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 ZNF669Q96BR6 464 aaPredicted RBP20■□□□□ 0.79
CDC42EP1-201ENST00000249014 TMEM216Q9P0N5 145 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 VANGL2Q9ULK5 521 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 RAD54BQ9Y620 910 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 PTCH2Q9Y6C5 1203 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 CEP350Q5VT06 3117 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 PROCP04070 461 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 DBN1Q16643 649 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 GDF6Q6KF10 455 aaPredicted RBP20■□□□□ 0.79
CDC42EP1-201ENST00000249014 CMC1Q7Z7K0 106 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 TMEM135Q86UB9 458 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 SMC1BQ8NDV3 1235 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 ATP2A3Q93084 1043 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 HDAC11Q96DB2 347 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 SMARCD1Q96GM5 515 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 CPNE1Q99829 537 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 TKTL2Q9H0I9 626 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 WDCPQ9H6R7 721 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 LRRC40Q9H9A6 602 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 CASS4Q9NQ75 786 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 ZNF358Q9NW07 568 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 TXNDC16Q9P2K2 825 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 OR12D3Q9UGF7 316 aa20■□□□□ 0.79
CDC42EP1-201ENST00000249014 MAGED2Q9UNF1 606 aaPredicted RBP20■□□□□ 0.79
CDC42EP1-201ENST00000249014 ZCWPW2A0A1B0GU75 182 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 NCAM2O15394 837 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 TYK2P29597 1187 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 RGS2P41220 211 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 GARSP41250 739 aaKnown RBP19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 GALNT2Q10471 571 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 UPP1Q16831 310 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 ARL13BQ3SXY8 428 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 CST9Q5W186 159 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 C10orf107Q8IVU9 208 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 TEX9Q8N6V9 391 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 MYLPFQ96A32 169 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 AZIN2Q96A70 460 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 MCUR1Q96AQ8 359 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 ATXN7L3BQ96GX2 97 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 AGAP2Q99490 1192 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 CCDC106Q9BWC9 280 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 GBA3Q9H227 469 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 CSNK1G1Q9HCP0 422 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 SCN10AQ9Y5Y9 1956 aa19.99■□□□□ 0.79
CDC42EP1-201ENST00000249014 LRIG2O94898 1065 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 ARRB2P32121 409 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 SLC1A6P48664 564 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 CXCR3P49682 368 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 ALDH18A1P54886 795 aaKnown RBP19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 PAN2Q504Q3 1202 aaKnown RBP19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 CERCAMQ5T4B2 595 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 GRTP1Q5TC63 336 aa19.98■□□□□ 0.79
CDC42EP1-201ENST00000249014 CXCL17Q6UXB2 119 aa19.98■□□□□ 0.79
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