RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 NINJ2Q9NZG7 142 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 XPO7Q9UIA9 1087 aaKnown RBP14.58□□□□□ -0.08
SDF2-201ENST00000247020 CHD5Q8TDI0 1954 aa14.58□□□□□ -0.08
SDF2-201ENST00000247020 HELZP42694 1942 aaKnown RBP14.57□□□□□ -0.08
SDF2-201ENST00000247020 LCHNA4D1U4 455 aa14.57□□□□□ -0.08
SDF2-201ENST00000247020 HMGB1P1B2RPK0 211 aaPredicted RBP14.57□□□□□ -0.08
SDF2-201ENST00000247020 COCHO43405 550 aa14.57□□□□□ -0.08
SDF2-201ENST00000247020 ACSL4O60488 711 aa14.57□□□□□ -0.08
SDF2-201ENST00000247020 LPXNO60711 386 aa14.57□□□□□ -0.08
SDF2-201ENST00000247020 TCEA3O75764 348 aa14.57□□□□□ -0.08
SDF2-201ENST00000247020 HARS2P49590 506 aaKnown RBP14.57□□□□□ -0.08
SDF2-201ENST00000247020 SARNPP82979 210 aaKnown RBP14.57□□□□□ -0.08
SDF2-201ENST00000247020 WASHC5Q12768 1159 aa14.57□□□□□ -0.08
SDF2-201ENST00000247020 PARP6Q2NL67 630 aa14.57□□□□□ -0.08
SDF2-201ENST00000247020 ANKRD22Q5VYY1 191 aa14.57□□□□□ -0.08
SDF2-201ENST00000247020 PDE12Q6L8Q7 609 aaKnown RBP14.57□□□□□ -0.08
SDF2-201ENST00000247020 B4GALNT4Q76KP1 1039 aa14.57□□□□□ -0.08
SDF2-201ENST00000247020 C14orf80Q86SX3 495 aa14.57□□□□□ -0.08
SDF2-201ENST00000247020 ARHGAP12Q8IWW6 846 aa14.57□□□□□ -0.08
SDF2-201ENST00000247020 ELMOD1Q8N336 334 aa14.57□□□□□ -0.08
SDF2-201ENST00000247020 MRPL43Q8N983 215 aaKnown RBP14.57□□□□□ -0.08
SDF2-201ENST00000247020 SPPL3Q8TCT6 385 aa14.57□□□□□ -0.08
SDF2-201ENST00000247020 LRRC39Q96DD0 335 aa14.57□□□□□ -0.08
SDF2-201ENST00000247020 PPCSQ9HAB8 311 aa14.57□□□□□ -0.08
SDF2-201ENST00000247020 ETNK1Q9HBU6 452 aa14.57□□□□□ -0.08
SDF2-201ENST00000247020 SAYSD1Q9NPB0 183 aa14.57□□□□□ -0.08
SDF2-201ENST00000247020 ZMYND8Q9ULU4 1186 aaPredicted RBP14.57□□□□□ -0.08
SDF2-201ENST00000247020 C2orf71A6NGG8 1288 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 ERI2A8K979 691 aaKnown RBP14.56□□□□□ -0.08
SDF2-201ENST00000247020 OLFM2O95897 454 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 GLUD1P00367 558 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 MLNP12872 115 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 PTPN3P26045 913 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 CA8P35219 290 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 MAPKAPK2P49137 400 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 SLC11A2P49281 568 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 NRLP54845 237 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 PDIA2Q13087 525 aaKnown RBP14.56□□□□□ -0.08
SDF2-201ENST00000247020 STAT4Q14765 748 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 ITPRIPL1Q6GPH6 555 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 FBXL22Q6P050 247 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 ZNF567Q8N184 647 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 ATPAF2Q8N5M1 289 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 KREMEN2Q8NCW0 462 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 POF1BQ8WVV4 589 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 PPP1R2P1Q96PQ5 205 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 DDX50Q9BQ39 737 aaKnown RBP14.56□□□□□ -0.08
SDF2-201ENST00000247020 CCDC77Q9BR77 488 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 XAB2Q9HCS7 855 aaKnown RBP14.56□□□□□ -0.08
SDF2-201ENST00000247020 VANGL2Q9ULK5 521 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 A0A087WUV0 522 aaPredicted RBP14.56□□□□□ -0.08
SDF2-201ENST00000247020 F5H5T6 163 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 SPAG6O75602 509 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 METTL18O95568 372 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 FGF19O95750 216 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 C8AP07357 584 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 IVLP07476 585 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 TACR2P21452 398 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 YBEYP58557 167 aaPredicted RBP14.56□□□□□ -0.08
SDF2-201ENST00000247020 ERVFC1P60507 584 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 IFI35P80217 286 aaPredicted RBP14.56□□□□□ -0.08
SDF2-201ENST00000247020 KYNUQ16719 465 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 TEX44Q53QW1 395 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 C6orf118Q5T5N4 469 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 TMEM150AQ86TG1 271 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 CHSY1Q86X52 802 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 ZBED8Q8IZ13 594 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 PGM2Q96G03 612 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 ATP6V1G3Q96LB4 118 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 SERPINB12Q96P63 405 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 KLF16Q9BXK1 252 aaPredicted RBP14.56□□□□□ -0.08
SDF2-201ENST00000247020 IL21Q9HBE4 155 aa14.56□□□□□ -0.08
SDF2-201ENST00000247020 MYO18AQ92614 2054 aaKnown RBP14.55□□□□□ -0.08
SDF2-201ENST00000247020 TCRBV7S3A2A0A539 114 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 GOLGA6CA6NDK9 693 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 ARHGAP42A6NI28 874 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 E7EVH7 732 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 MATN3O15232 486 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 STC2O76061 302 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 ACSL3O95573 720 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 APRTP07741 180 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 HMBSP08397 361 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 GOLGA6DP0CG33 693 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 CDC25CP30307 473 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 HOXA9P31269 272 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 PHBP35232 272 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 MAGEA3P43357 314 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 ANO4Q32M45 955 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 KRT71Q3SY84 523 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 CCDC38Q502W7 563 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 DNAJC21Q5F1R6 531 aaKnown RBP14.55□□□□□ -0.08
SDF2-201ENST00000247020 RABGAP1LQ5R372 815 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 TTC39BQ5VTQ0 682 aaPredicted RBP14.55□□□□□ -0.08
SDF2-201ENST00000247020 RAP1GAP2Q684P5 730 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 TP53INP2Q8IXH6 220 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 KLHDC8BQ8IXV7 354 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 RIBC1Q8N443 379 aaPredicted RBP14.55□□□□□ -0.08
SDF2-201ENST00000247020 ATP11CQ8NB49 1132 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 OR2W6PQ8NHA6 318 aa14.55□□□□□ -0.08
SDF2-201ENST00000247020 PYROXD1Q8WU10 500 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms