RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 FAM50BQ9Y247 325 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 SHROOM3Q8TF72 1996 aa20.74■□□□□ 0.91
SNRPA-201ENST00000243563 TRIM24O15164 1050 aa20.73■□□□□ 0.91
SNRPA-201ENST00000243563 CHADO15335 359 aa20.73■□□□□ 0.91
SNRPA-201ENST00000243563 MAP3K6O95382 1288 aa20.73■□□□□ 0.91
SNRPA-201ENST00000243563 BMP1P13497 986 aa20.73■□□□□ 0.91
SNRPA-201ENST00000243563 PTPN7P35236 360 aa20.73■□□□□ 0.91
SNRPA-201ENST00000243563 MESP2Q0VG99 397 aa20.73■□□□□ 0.91
SNRPA-201ENST00000243563 PPP2R5EQ16537 467 aa20.73■□□□□ 0.91
SNRPA-201ENST00000243563 FSCBQ5H9T9 825 aa20.73■□□□□ 0.91
SNRPA-201ENST00000243563 ADAT2Q7Z6V5 191 aaKnown RBP20.73■□□□□ 0.91
SNRPA-201ENST00000243563 MAP7D3Q8IWC1 876 aa20.73■□□□□ 0.91
SNRPA-201ENST00000243563 BBS2Q9BXC9 721 aa20.73■□□□□ 0.91
SNRPA-201ENST00000243563 ECT2Q9H8V3 914 aa20.73■□□□□ 0.91
SNRPA-201ENST00000243563 ZNF487B1APH4 448 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 MFSD11O43934 449 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 PECAM1P16284 738 aaPredicted RBP20.72■□□□□ 0.91
SNRPA-201ENST00000243563 RHOQP17081 205 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 COPS2P61201 443 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 SLC10A2Q12908 348 aaPredicted RBP20.72■□□□□ 0.91
SNRPA-201ENST00000243563 KLF1Q13351 362 aaPredicted RBP20.72■□□□□ 0.91
SNRPA-201ENST00000243563 PDGFRLQ15198 375 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 ANO4Q32M45 955 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 MPPE1Q53F39 396 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 ODF2Q5BJF6 829 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 RABGAP1LQ5R372 815 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 SLC9A4Q6AI14 798 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 CXorf57Q6NSI4 855 aaKnown RBP20.72■□□□□ 0.91
SNRPA-201ENST00000243563 VSIG1Q86XK7 387 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 RASGEF1CQ8N431 466 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 NAT16Q8N8M0 369 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 RTL3Q8N8U3 475 aaKnown RBP20.72■□□□□ 0.91
SNRPA-201ENST00000243563 LRRN4Q8WUT4 740 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 HAUS1Q96CS2 278 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 CAPZA3Q96KX2 299 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 FAM118BQ9BPY3 351 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 TMEM248Q9NWD8 314 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 MARK1Q9P0L2 795 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 SAR1BQ9Y6B6 198 aa20.72■□□□□ 0.91
SNRPA-201ENST00000243563 A0A1B0GVM2 712 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 TCAF2A6NFQ2 919 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 WASH4PA8MWX3 477 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 PDE2AO00408 941 aaPredicted RBP20.71■□□□□ 0.91
SNRPA-201ENST00000243563 DAPK3O43293 454 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 CST8O60676 142 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 ADH5P11766 374 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 TYRP14679 529 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 SOX9P48436 509 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 GBE1Q04446 702 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 RUNX3Q13761 415 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 SIX1Q15475 284 aaPredicted RBP20.71■□□□□ 0.91
SNRPA-201ENST00000243563 ACBD5Q5T8D3 534 aaPredicted RBP20.71■□□□□ 0.91
SNRPA-201ENST00000243563 SEL1L2Q5TEA6 688 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 SLC13A5Q86YT5 568 aaPredicted RBP20.71■□□□□ 0.91
SNRPA-201ENST00000243563 CARNMT1Q8N4J0 409 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 UBE2Q2Q8WVN8 375 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 ATP2A3Q93084 1043 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 CELF6Q96J87 481 aaKnown RBP20.71■□□□□ 0.91
SNRPA-201ENST00000243563 R3HDM2Q9Y2K5 976 aaKnown RBP20.71■□□□□ 0.91
SNRPA-201ENST00000243563 C19orf67A6NJJ6 358 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 LUC7L3O95232 432 aaKnown RBP20.71■□□□□ 0.91
SNRPA-201ENST00000243563 PRLRP16471 622 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 HTR7P34969 479 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 CDH4P55283 916 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 FAM182AQ5T1J6 154 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 C1orf228Q6PIY5 440 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 CREG2Q8IUH2 290 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 ARHGAP12Q8IWW6 846 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 PBKQ96KB5 322 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 ASB2Q96Q27 587 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 BRD9Q9H8M2 597 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 IGSF9Q9P2J2 1179 aa20.71■□□□□ 0.91
SNRPA-201ENST00000243563 KIF2AO00139 706 aaPredicted RBP20.7■□□□□ 0.9
SNRPA-201ENST00000243563 FGF10O15520 208 aaPredicted RBP20.7■□□□□ 0.9
SNRPA-201ENST00000243563 NFATC1O95644 943 aa20.7■□□□□ 0.9
SNRPA-201ENST00000243563 FGGP02679 453 aa20.7■□□□□ 0.9
SNRPA-201ENST00000243563 TCP1P17987 556 aaKnown RBP20.7■□□□□ 0.9
SNRPA-201ENST00000243563 SLC6A11P48066 632 aa20.7■□□□□ 0.9
SNRPA-201ENST00000243563 ZNF135P52742 658 aaPredicted RBP20.7■□□□□ 0.9
SNRPA-201ENST00000243563 BBS12Q6ZW61 710 aa20.7■□□□□ 0.9
SNRPA-201ENST00000243563 B4GALNT4Q76KP1 1039 aa20.7■□□□□ 0.9
SNRPA-201ENST00000243563 CHST9Q7L1S5 443 aa20.7■□□□□ 0.9
SNRPA-201ENST00000243563 LMLNQ96KR4 655 aa20.7■□□□□ 0.9
SNRPA-201ENST00000243563 CATSPERBQ9H7T0 1116 aa20.7■□□□□ 0.9
SNRPA-201ENST00000243563 CD320Q9NPF0 282 aa20.7■□□□□ 0.9
SNRPA-201ENST00000243563 PRKAG3Q9UGI9 489 aa20.7■□□□□ 0.9
SNRPA-201ENST00000243563 APOL1O14791 398 aa20.69■□□□□ 0.9
SNRPA-201ENST00000243563 HOXC11O43248 304 aaPredicted RBP20.69■□□□□ 0.9
SNRPA-201ENST00000243563 CLDN11O75508 207 aa20.69■□□□□ 0.9
SNRPA-201ENST00000243563 CD70P32970 193 aa20.69■□□□□ 0.9
SNRPA-201ENST00000243563 PAFAH1B3Q15102 231 aaKnown RBP20.69■□□□□ 0.9
SNRPA-201ENST00000243563 TTC39BQ5VTQ0 682 aaPredicted RBP20.69■□□□□ 0.9
SNRPA-201ENST00000243563 AFMIDQ63HM1 303 aa20.69■□□□□ 0.9
SNRPA-201ENST00000243563 ETFBKMTQ8IXQ9 262 aa20.69■□□□□ 0.9
SNRPA-201ENST00000243563 ATXN2LQ8WWM7 1075 aaKnown RBP20.69■□□□□ 0.9
SNRPA-201ENST00000243563 A0A0D9SEW6 157 aa20.68■□□□□ 0.9
SNRPA-201ENST00000243563 ADH1CP00326 375 aa20.68■□□□□ 0.9
SNRPA-201ENST00000243563 CYBBP04839 570 aa20.68■□□□□ 0.9
SNRPA-201ENST00000243563 MZF1P28698 734 aaPredicted RBP20.68■□□□□ 0.9
SNRPA-201ENST00000243563 OR1E1P30953 314 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms