RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 MTBPQ96DY7 904 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 TSGA13Q96PP4 275 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 ELAC2Q9BQ52 826 aaKnown RBP23.86■■□□□ 1.41
MSX2-201ENST00000239243 OLA1Q9NTK5 396 aaKnown RBP23.86■■□□□ 1.41
MSX2-201ENST00000239243 CLIC5Q9NZA1 410 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 MYO18AQ92614 2054 aaKnown RBP23.85■■□□□ 1.41
MSX2-201ENST00000239243 TBKBP1A7MCY6 615 aa23.85■■□□□ 1.41
MSX2-201ENST00000239243 KRT38O76015 456 aa23.85■■□□□ 1.41
MSX2-201ENST00000239243 GALTP07902 379 aa23.85■■□□□ 1.41
MSX2-201ENST00000239243 YWHAQP27348 245 aa23.85■■□□□ 1.41
MSX2-201ENST00000239243 GPR15P49685 360 aa23.85■■□□□ 1.41
MSX2-201ENST00000239243 PGFP49763 221 aa23.85■■□□□ 1.41
MSX2-201ENST00000239243 FAAP100Q0VG06 881 aa23.85■■□□□ 1.41
MSX2-201ENST00000239243 SDHAF4Q5VUM1 108 aa23.85■■□□□ 1.41
MSX2-201ENST00000239243 ANKRD33Q7Z3H0 272 aa23.85■■□□□ 1.41
MSX2-201ENST00000239243 TTC17Q96AE7 1141 aa23.85■■□□□ 1.41
MSX2-201ENST00000239243 GRAMD1AQ96CP6 724 aa23.85■■□□□ 1.41
MSX2-201ENST00000239243 C1orf74Q96LT6 269 aa23.85■■□□□ 1.41
MSX2-201ENST00000239243 FGFR1OP2Q9NVK5 253 aa23.85■■□□□ 1.41
MSX2-201ENST00000239243 MOCS1Q9NZB8 636 aa23.85■■□□□ 1.41
MSX2-201ENST00000239243 FNIP2Q9P278 1114 aa23.85■■□□□ 1.41
MSX2-201ENST00000239243 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.84■■□□□ 1.41
MSX2-201ENST00000239243 MYO1CO00159 1063 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 ALDH1A2O94788 518 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 CCNCP24863 283 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 SERPINB9P50453 376 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 CCDC121Q6ZUS5 278 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 SPATA17Q96L03 361 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 OSER1Q9NX31 292 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 WDR27A2RRH5 827 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 MTMR11A4FU01 709 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 ZBTB24O43167 697 aaPredicted RBP23.84■■□□□ 1.41
MSX2-201ENST00000239243 SNX3O60493 162 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 ARPP19P56211 112 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 SESN2P58004 480 aaPredicted RBP23.84■■□□□ 1.41
MSX2-201ENST00000239243 PRPSAP1Q14558 356 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 PDK4Q16654 411 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 ATPAF2Q8N5M1 289 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 CDKL2Q92772 493 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 TEKT5Q96M29 485 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 RNF208Q9H0X6 261 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 GMIPQ9P107 970 aa23.84■■□□□ 1.41
MSX2-201ENST00000239243 AP3B1O00203 1094 aa23.83■■□□□ 1.41
MSX2-201ENST00000239243 TAC1P20366 129 aa23.83■■□□□ 1.41
MSX2-201ENST00000239243 MGAT1P26572 445 aa23.83■■□□□ 1.41
MSX2-201ENST00000239243 SLC18A2Q05940 514 aa23.83■■□□□ 1.41
MSX2-201ENST00000239243 NAB1Q13506 487 aa23.83■■□□□ 1.41
MSX2-201ENST00000239243 FBXO32Q969P5 355 aa23.83■■□□□ 1.41
MSX2-201ENST00000239243 SLC39A13Q96H72 371 aa23.83■■□□□ 1.41
MSX2-201ENST00000239243 SCLYQ96I15 445 aa23.83■■□□□ 1.41
MSX2-201ENST00000239243 CELF6Q96J87 481 aaKnown RBP23.83■■□□□ 1.41
MSX2-201ENST00000239243 TTPALQ9BTX7 342 aa23.83■■□□□ 1.41
MSX2-201ENST00000239243 TLR8Q9NR97 1041 aaKnown RBP23.83■■□□□ 1.41
MSX2-201ENST00000239243 DONSONQ9NYP3 566 aa23.83■■□□□ 1.41
MSX2-201ENST00000239243 ARHGAP42A6NI28 874 aa23.83■■□□□ 1.4
MSX2-201ENST00000239243 PSMD3O43242 534 aa23.83■■□□□ 1.4
MSX2-201ENST00000239243 TBC1D4O60343 1298 aa23.83■■□□□ 1.4
MSX2-201ENST00000239243 CNTFP26441 200 aa23.83■■□□□ 1.4
MSX2-201ENST00000239243 MLLT6P55198 1093 aaPredicted RBP23.83■■□□□ 1.4
MSX2-201ENST00000239243 TBX4P57082 545 aa23.83■■□□□ 1.4
MSX2-201ENST00000239243 USP46P62068 366 aa23.83■■□□□ 1.4
MSX2-201ENST00000239243 ZBTB17Q13105 803 aa23.83■■□□□ 1.4
MSX2-201ENST00000239243 TCTN1Q2MV58 587 aa23.83■■□□□ 1.4
MSX2-201ENST00000239243 LVRNQ6Q4G3 990 aa23.83■■□□□ 1.4
MSX2-201ENST00000239243 LRRC49Q8IUZ0 686 aa23.83■■□□□ 1.4
MSX2-201ENST00000239243 DEPDC1BQ8WUY9 529 aa23.83■■□□□ 1.4
MSX2-201ENST00000239243 DPF3Q92784 378 aa23.83■■□□□ 1.4
MSX2-201ENST00000239243 APOPT1Q96IL0 206 aa23.83■■□□□ 1.4
MSX2-201ENST00000239243 B3GALT6Q96L58 329 aa23.83■■□□□ 1.4
MSX2-201ENST00000239243 AGAP3Q96P47 875 aa23.83■■□□□ 1.4
MSX2-201ENST00000239243 PLCD4Q9BRC7 762 aa23.83■■□□□ 1.4
MSX2-201ENST00000239243 NUDT5Q9UKK9 219 aa23.83■■□□□ 1.4
MSX2-201ENST00000239243 CXorf49A8MYA2 514 aaPredicted RBP23.82■■□□□ 1.4
MSX2-201ENST00000239243 E9PAM4 449 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 LPXNO60711 386 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 CCL5P13501 91 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 RPL10AP62906 217 aaKnown RBP23.82■■□□□ 1.4
MSX2-201ENST00000239243 MTFR1Q15390 333 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 SLC1A5Q15758 541 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 MGAT5BQ3V5L5 792 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 RNF187Q5TA31 235 aaPredicted RBP23.82■■□□□ 1.4
MSX2-201ENST00000239243 ZNF449Q6P9G9 518 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 HS3ST4Q9Y661 456 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 TET1Q8NFU7 2136 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 TRIM49D1C9J1S8 452 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 DFFAO00273 331 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 MOCS2O96007 188 aaPredicted RBP23.82■■□□□ 1.4
MSX2-201ENST00000239243 MYCP01106 439 aaPredicted RBP23.82■■□□□ 1.4
MSX2-201ENST00000239243 POLBP06746 335 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 TUBP50607 506 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 RTP2Q5QGT7 225 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 ACBD5Q5T8D3 534 aaPredicted RBP23.82■■□□□ 1.4
MSX2-201ENST00000239243 KCTD11Q693B1 232 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 TIGD7Q6NT04 549 aaPredicted RBP23.82■■□□□ 1.4
MSX2-201ENST00000239243 TRMT10BQ6PF06 316 aaKnown RBP23.82■■□□□ 1.4
MSX2-201ENST00000239243 RTL3Q8N8U3 475 aaKnown RBP23.82■■□□□ 1.4
MSX2-201ENST00000239243 TCP10LQ8TDR4 215 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 LRRC8CQ8TDW0 803 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 ARNTL2Q8WYA1 636 aa23.82■■□□□ 1.4
MSX2-201ENST00000239243 PPP1R2P1Q96PQ5 205 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms