RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 AMPD1P23109 780 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 PCSK1P29120 753 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 RPL22P35268 128 aaKnown RBP8.92□□□□□ -0.98
VPS4B-201ENST00000238497 CCR2P41597 374 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 ZNF132P52740 706 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 SLC8A3P57103 927 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 CYP4F8P98187 520 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 HTR4Q13639 388 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 PTK6Q13882 451 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 NFE2Q16621 373 aaPredicted RBP8.92□□□□□ -0.98
VPS4B-201ENST00000238497 TANGO2Q6ICL3 276 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 MICALCLQ6ZW33 695 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 KDELC2Q7Z4H8 507 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 ITIH5Q86UX2 942 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 LRRTM3Q86VH5 581 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 MAP7D3Q8IWC1 876 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 ZSCAN18Q8TBC5 510 aaPredicted RBP8.92□□□□□ -0.98
VPS4B-201ENST00000238497 CHMP6Q96FZ7 201 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 PEBP4Q96S96 227 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 STMN4Q9H169 189 aaPredicted RBP8.92□□□□□ -0.98
VPS4B-201ENST00000238497 TRPC7Q9HCX4 862 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 ARHGEF3Q9NR81 526 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 DDX56Q9NY93 547 aaKnown RBP8.92□□□□□ -0.98
VPS4B-201ENST00000238497 EPS15L1Q9UBC2 864 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 SRFP11831 508 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 CYP2F1P24903 491 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 RBL1P28749 1068 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 GDI1P31150 447 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 GPR15P49685 360 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 DRG2P55039 364 aaKnown RBP8.92□□□□□ -0.98
VPS4B-201ENST00000238497 CRADDP78560 199 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 SKOR1P84550 965 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 ADIGQ0VDE8 80 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 SOWAHAQ2M3V2 549 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 ARHGAP15Q53QZ3 475 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 MDH1BQ5I0G3 518 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 STXBP5Q5T5C0 1151 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 GPR158Q5T848 1215 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 AGBL2Q5U5Z8 902 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 PDIK1LQ8N165 341 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 SIX6OS1Q8N1H7 587 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 LRRC52Q8N7C0 313 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 KCNN1Q92952 543 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 SEC16BQ96JE7 1060 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 RHOBTB2Q9BYZ6 727 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 ZNF518BQ9C0D4 1074 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 CACNA1IQ9P0X4 2223 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 PLXNA3P51805 1871 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 FAM107AO95990 144 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 DCNP07585 359 aaKnown RBP8.92□□□□□ -0.98
VPS4B-201ENST00000238497 GBP1P32455 592 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 GRIK1P39086 918 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 PITX1P78337 314 aaPredicted RBP8.92□□□□□ -0.98
VPS4B-201ENST00000238497 AP1B1Q10567 949 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 CYP1B1Q16678 543 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 HHATQ5VTY9 493 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 TRMT10CQ7L0Y3 403 aaKnown RBP8.92□□□□□ -0.98
VPS4B-201ENST00000238497 OSTM1Q86WC4 334 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 ZNF354CQ86Y25 554 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 PPM1NQ8N819 430 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 FBXO36Q8NEA4 188 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 ATOH1Q92858 354 aaPredicted RBP8.92□□□□□ -0.98
VPS4B-201ENST00000238497 ASIC4Q96FT7 647 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 SYT15Q9BQS2 421 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 CNPY3Q9BT09 278 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 FOXQ1Q9C009 403 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 TBC1D17Q9HA65 648 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 NDRG2Q9UN36 371 aaKnown RBP8.92□□□□□ -0.98
VPS4B-201ENST00000238497 MFHAS1Q9Y4C4 1052 aa8.92□□□□□ -0.98
VPS4B-201ENST00000238497 A0A1W2PPM1 405 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 MYBPHLA2RUH7 354 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 PAPSS1O43252 624 aaPredicted RBP8.91□□□□□ -0.98
VPS4B-201ENST00000238497 TRUB2O95900 331 aaKnown RBP8.91□□□□□ -0.98
VPS4B-201ENST00000238497 C1RP00736 705 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 F7P08709 466 aaPredicted RBP8.91□□□□□ -0.98
VPS4B-201ENST00000238497 IVDP26440 423 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 DNAJC3Q13217 504 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 KLF1Q13351 362 aaPredicted RBP8.91□□□□□ -0.98
VPS4B-201ENST00000238497 ZNF268Q14587 947 aaPredicted RBP8.91□□□□□ -0.98
VPS4B-201ENST00000238497 FAM78AQ5JUQ0 283 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 FNBP1LQ5T0N5 605 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 CCDC63Q8NA47 563 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 SPPL2BQ8TCT7 592 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 DEPDC1BQ8WUY9 529 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 SPOCK2Q92563 424 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 NXPE3Q969Y0 559 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 ATXN7L3BQ96GX2 97 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 ZSWIM3Q96MP5 696 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 KCNK16Q96T55 309 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 OXCT2Q9BYC2 517 aaPredicted RBP8.91□□□□□ -0.98
VPS4B-201ENST00000238497 SLC13A1Q9BZW2 595 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 SMG9Q9H0W8 520 aaKnown RBP8.91□□□□□ -0.98
VPS4B-201ENST00000238497 TMLHEQ9NVH6 421 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 GDE1Q9NZC3 331 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 ZFP37Q9Y6Q3 630 aaPredicted RBP8.91□□□□□ -0.98
VPS4B-201ENST00000238497 DNALI1O14645 258 aaPredicted RBP8.91□□□□□ -0.98
VPS4B-201ENST00000238497 PAEPP09466 180 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 SAT1P21673 171 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 BDNFP23560 247 aa8.91□□□□□ -0.98
VPS4B-201ENST00000238497 PAX3P23760 479 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms