RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 MYL2P10916 166 aa16.58■□□□□ 0.24
UBE3D-201ENST00000237186 SERPINB3P29508 390 aa16.58■□□□□ 0.24
UBE3D-201ENST00000237186 CYP2C18P33260 490 aa16.58■□□□□ 0.24
UBE3D-201ENST00000237186 TM4SF4P48230 202 aa16.58■□□□□ 0.24
UBE3D-201ENST00000237186 TMPRSS15P98073 1019 aa16.58■□□□□ 0.24
UBE3D-201ENST00000237186 CHI3L2Q15782 390 aa16.58■□□□□ 0.24
UBE3D-201ENST00000237186 GRTP1Q5TC63 336 aa16.58■□□□□ 0.24
UBE3D-201ENST00000237186 BSPRYQ5W0U4 402 aa16.58■□□□□ 0.24
UBE3D-201ENST00000237186 CCDC91Q7Z6B0 441 aa16.58■□□□□ 0.24
UBE3D-201ENST00000237186 METTL23Q86XA0 190 aa16.58■□□□□ 0.24
UBE3D-201ENST00000237186 NPWQ8N729 165 aa16.58■□□□□ 0.24
UBE3D-201ENST00000237186 CERS2Q96G23 380 aa16.58■□□□□ 0.24
UBE3D-201ENST00000237186 TACO1Q9BSH4 297 aaKnown RBP16.58■□□□□ 0.24
UBE3D-201ENST00000237186 TRIM62Q9BVG3 475 aa16.58■□□□□ 0.24
UBE3D-201ENST00000237186 TKTL2Q9H0I9 626 aa16.58■□□□□ 0.24
UBE3D-201ENST00000237186 GPBP1L1Q9HC44 474 aaPredicted RBP16.58■□□□□ 0.24
UBE3D-201ENST00000237186 OR12D3Q9UGF7 316 aa16.58■□□□□ 0.24
UBE3D-201ENST00000237186 A8MUI8 341 aa16.57■□□□□ 0.24
UBE3D-201ENST00000237186 F5H423 210 aaPredicted RBP16.57■□□□□ 0.24
UBE3D-201ENST00000237186 CA12O43570 354 aa16.57■□□□□ 0.24
UBE3D-201ENST00000237186 GLRA3O75311 464 aa16.57■□□□□ 0.24
UBE3D-201ENST00000237186 IGLV3-25P01717 112 aa16.57■□□□□ 0.24
UBE3D-201ENST00000237186 ITGA2BP08514 1039 aa16.57■□□□□ 0.24
UBE3D-201ENST00000237186 CD68P34810 354 aaPredicted RBP16.57■□□□□ 0.24
UBE3D-201ENST00000237186 GP5P40197 560 aa16.57■□□□□ 0.24
UBE3D-201ENST00000237186 GARSP41250 739 aaKnown RBP16.57■□□□□ 0.24
UBE3D-201ENST00000237186 HSF5Q4G112 596 aaPredicted RBP16.57■□□□□ 0.24
UBE3D-201ENST00000237186 CES4AQ5XG92 561 aa16.57■□□□□ 0.24
UBE3D-201ENST00000237186 ITPRIPL1Q6GPH6 555 aa16.57■□□□□ 0.24
UBE3D-201ENST00000237186 ZSCAN18Q8TBC5 510 aaPredicted RBP16.57■□□□□ 0.24
UBE3D-201ENST00000237186 ATP2A3Q93084 1043 aa16.57■□□□□ 0.24
UBE3D-201ENST00000237186 NSL1Q96IY1 281 aa16.57■□□□□ 0.24
UBE3D-201ENST00000237186 CPNE1Q99829 537 aa16.57■□□□□ 0.24
UBE3D-201ENST00000237186 GBA3Q9H227 469 aa16.57■□□□□ 0.24
UBE3D-201ENST00000237186 DMAP1Q9NPF5 467 aaPredicted RBP16.57■□□□□ 0.24
UBE3D-201ENST00000237186 BFARQ9NZS9 450 aa16.57■□□□□ 0.24
UBE3D-201ENST00000237186 RPS6KL1Q9Y6S9 549 aa16.57■□□□□ 0.24
UBE3D-201ENST00000237186 FAM237BA0A1B0GVD1 139 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 SEPT4O43236 478 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 CCDC22O60826 627 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 ADAMTS4O75173 837 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 B3GAT3O94766 335 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 USP1O94782 785 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 LRIG2O94898 1065 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 PGK1P00558 417 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 CD52P31358 61 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 MAGEA12P43365 314 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 GRIK3Q13003 919 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 PDE1CQ14123 709 aaPredicted RBP16.56■□□□□ 0.24
UBE3D-201ENST00000237186 PAXIP1Q6ZW49 1069 aaPredicted RBP16.56■□□□□ 0.24
UBE3D-201ENST00000237186 OR52K1Q8NGK4 314 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 SH3TC2Q8TF17 1288 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 TEKT5Q96M29 485 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 UROC1Q96N76 676 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 FCRL3Q96P31 734 aaPredicted RBP16.56■□□□□ 0.24
UBE3D-201ENST00000237186 SIKE1Q9BRV8 207 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 THAP1Q9NVV9 213 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 ADAM28Q9UKQ2 775 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 EMCNQ9ULC0 261 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 TMEM88BA6NKF7 163 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 AP3B1O00203 1094 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 TPP1O14773 563 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 INPPL1O15357 1258 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 ZBTB24O43167 697 aaPredicted RBP16.56■□□□□ 0.24
UBE3D-201ENST00000237186 CACNG3O60359 315 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 MGEA5O60502 916 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 DNAJB2P25686 324 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 NPY2RP49146 381 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 MAPRE1Q15691 268 aaKnown RBP16.56■□□□□ 0.24
UBE3D-201ENST00000237186 WASHC2DQ5SRD0 308 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 CTU1Q7Z7A3 348 aaKnown RBP16.56■□□□□ 0.24
UBE3D-201ENST00000237186 CRLF3Q8IUI8 442 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 FAM13CQ8NE31 585 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 TRIB2Q92519 343 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 EDEM1Q92611 657 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 TSGA13Q96PP4 275 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 FBXO6Q9NRD1 293 aaPredicted RBP16.56■□□□□ 0.24
UBE3D-201ENST00000237186 ZFATQ9P243 1243 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 VANGL2Q9ULK5 521 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 PSAT1Q9Y617 370 aa16.56■□□□□ 0.24
UBE3D-201ENST00000237186 ZCWPW2A0A1B0GU75 182 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 PLIN3O60664 434 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 CALB2P22676 271 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 BDNFP23560 247 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 EPHB2P29323 1055 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 HTR7P34969 479 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 ZBTB16Q05516 673 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 ZBTB17Q13105 803 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 STX3Q13277 289 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 TUSC3Q13454 348 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 TAC4Q86UU9 113 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 LONP2Q86WA8 852 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 DQX1Q8TE96 717 aaKnown RBP16.55■□□□□ 0.24
UBE3D-201ENST00000237186 RSPH1Q8WYR4 309 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 TBC1D31Q96DN5 1066 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 HHIPL1Q96JK4 782 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 BTBD10Q9BSF8 475 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 MLPHQ9BV36 600 aaPredicted RBP16.55■□□□□ 0.24
UBE3D-201ENST00000237186 RHOBTB2Q9BYZ6 727 aa16.55■□□□□ 0.24
UBE3D-201ENST00000237186 TMLHEQ9NVH6 421 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms