RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 CKMP06732 381 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 RHOP08100 348 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 CDC25CP30307 473 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 SERPINB6P35237 376 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 CASP8Q14790 479 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 LRRC31Q6UY01 552 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 PDZD4Q76G19 769 aaPredicted RBP19.1■□□□□ 0.65
SNX17-201ENST00000233575 TDHQ8IZJ6 230 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 LGI2Q8N0V4 545 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 CFAP52Q8N1V2 620 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 C12orf76Q8N812 135 aaPredicted RBP19.1■□□□□ 0.65
SNX17-201ENST00000233575 VN1R2Q8NFZ6 395 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 CCHCR1Q8TD31 782 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 P2RY11Q96G91 374 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 SLC46A2Q9BY10 475 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 ZYG11BQ9C0D3 744 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 SLC39A8Q9C0K1 460 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 SMG9Q9H0W8 520 aaKnown RBP19.1■□□□□ 0.65
SNX17-201ENST00000233575 ANAPC5Q9UJX4 755 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 NYNRINQ9P2P1 1898 aaKnown RBP19.1■□□□□ 0.65
SNX17-201ENST00000233575 HACD1B0YJ81 288 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 KCNK1O00180 336 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 PPP1R12AO14974 1030 aaPredicted RBP19.1■□□□□ 0.65
SNX17-201ENST00000233575 GREM1O60565 184 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 PTPN2P17706 415 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 CHKAP35790 457 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 GARSP41250 739 aaKnown RBP19.1■□□□□ 0.65
SNX17-201ENST00000233575 SLC11A2P49281 568 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 EPHA5P54756 1037 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 HIBCHQ6NVY1 386 aaPredicted RBP19.1■□□□□ 0.65
SNX17-201ENST00000233575 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.1■□□□□ 0.65
SNX17-201ENST00000233575 ZNF707Q96C28 371 aaPredicted RBP19.1■□□□□ 0.65
SNX17-201ENST00000233575 PRICKLE1Q96MT3 831 aaPredicted RBP19.1■□□□□ 0.65
SNX17-201ENST00000233575 NOL6Q9H6R4 1146 aaKnown RBP19.1■□□□□ 0.65
SNX17-201ENST00000233575 SEPT10Q9P0V9 454 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 ZNF212Q9UDV6 495 aa19.1■□□□□ 0.65
SNX17-201ENST00000233575 C5orf42Q9H799 3197 aa19.09■□□□□ 0.65
SNX17-201ENST00000233575 CCDC195A0A1B0GUA6 201 aa19.09■□□□□ 0.65
SNX17-201ENST00000233575 DRGXA6NNA5 263 aa19.09■□□□□ 0.65
SNX17-201ENST00000233575 DFFAO00273 331 aa19.09■□□□□ 0.65
SNX17-201ENST00000233575 C1RP00736 705 aa19.09■□□□□ 0.65
SNX17-201ENST00000233575 RHOQP17081 205 aa19.09■□□□□ 0.65
SNX17-201ENST00000233575 HOXA9P31269 272 aa19.09■□□□□ 0.65
SNX17-201ENST00000233575 SGSHP51688 502 aa19.09■□□□□ 0.65
SNX17-201ENST00000233575 GAD2Q05329 585 aa19.09■□□□□ 0.65
SNX17-201ENST00000233575 TEAD2Q15562 447 aa19.09■□□□□ 0.65
SNX17-201ENST00000233575 SYCP2LQ5T4T6 812 aa19.09■□□□□ 0.65
SNX17-201ENST00000233575 RNASEH2BQ5TBB1 312 aaKnown RBP19.09■□□□□ 0.65
SNX17-201ENST00000233575 FAXCQ5TGI0 409 aa19.09■□□□□ 0.65
SNX17-201ENST00000233575 ANKRD22Q5VYY1 191 aa19.09■□□□□ 0.65
SNX17-201ENST00000233575 GRASPQ7Z6J2 395 aaPredicted RBP19.09■□□□□ 0.65
SNX17-201ENST00000233575 GCNAQ96QF7 691 aa19.09■□□□□ 0.65
SNX17-201ENST00000233575 DNAJC17Q9NVM6 304 aaKnown RBP19.09■□□□□ 0.65
SNX17-201ENST00000233575 TPX2Q9ULW0 747 aaKnown RBP19.09■□□□□ 0.65
SNX17-201ENST00000233575 TCRBV7S3A2A0A539 114 aa19.08■□□□□ 0.65
SNX17-201ENST00000233575 SPDYE4A6NLX3 237 aa19.08■□□□□ 0.65
SNX17-201ENST00000233575 WASH4PA8MWX3 477 aa19.08■□□□□ 0.65
SNX17-201ENST00000233575 F5H5T6 163 aa19.08■□□□□ 0.65
SNX17-201ENST00000233575 PPIDQ08752 370 aaKnown RBP19.08■□□□□ 0.65
SNX17-201ENST00000233575 WASHC5Q12768 1159 aa19.08■□□□□ 0.65
SNX17-201ENST00000233575 DUSP6Q16828 381 aa19.08■□□□□ 0.65
SNX17-201ENST00000233575 RTL10Q7L3V2 364 aa19.08■□□□□ 0.65
SNX17-201ENST00000233575 TMC3Q7Z5M5 1100 aa19.08■□□□□ 0.65
SNX17-201ENST00000233575 CPT1BQ92523 772 aa19.08■□□□□ 0.65
SNX17-201ENST00000233575 LRRC45Q96CN5 670 aa19.08■□□□□ 0.65
SNX17-201ENST00000233575 HDAC11Q96DB2 347 aa19.08■□□□□ 0.65
SNX17-201ENST00000233575 TMEM248Q9NWD8 314 aa19.08■□□□□ 0.65
SNX17-201ENST00000233575 FARP1Q9Y4F1 1045 aaPredicted RBP19.08■□□□□ 0.65
SNX17-201ENST00000233575 RNF103O00237 685 aa19.08■□□□□ 0.64
SNX17-201ENST00000233575 HNRNPA1P09651 372 aaKnown RBP eCLIP19.08■□□□□ 0.64
SNX17-201ENST00000233575 BMP8BP34820 402 aa19.08■□□□□ 0.64
SNX17-201ENST00000233575 NUMBP49757 651 aa19.08■□□□□ 0.64
SNX17-201ENST00000233575 RPS24P62847 133 aaKnown RBP19.08■□□□□ 0.64
SNX17-201ENST00000233575 BASP1P80723 227 aaKnown RBP19.08■□□□□ 0.64
SNX17-201ENST00000233575 DHX9Q08211 1270 aaKnown RBP19.08■□□□□ 0.64
SNX17-201ENST00000233575 AFMIDQ63HM1 303 aa19.08■□□□□ 0.64
SNX17-201ENST00000233575 POTEHQ6S545 545 aa19.08■□□□□ 0.64
SNX17-201ENST00000233575 HDXQ7Z353 690 aa19.08■□□□□ 0.64
SNX17-201ENST00000233575 TIFAQ96CG3 184 aa19.08■□□□□ 0.64
SNX17-201ENST00000233575 PRKD2Q9BZL6 878 aa19.08■□□□□ 0.64
SNX17-201ENST00000233575 RAD54BQ9Y620 910 aa19.08■□□□□ 0.64
SNX17-201ENST00000233575 ZFP37Q9Y6Q3 630 aaPredicted RBP19.08■□□□□ 0.64
SNX17-201ENST00000233575 TRAV19A0A0A6YYK7 116 aa19.07■□□□□ 0.64
SNX17-201ENST00000233575 F5H423 210 aaPredicted RBP19.07■□□□□ 0.64
SNX17-201ENST00000233575 MAP2K7O14733 419 aa19.07■□□□□ 0.64
SNX17-201ENST00000233575 GCATO75600 419 aa19.07■□□□□ 0.64
SNX17-201ENST00000233575 METTL18O95568 372 aa19.07■□□□□ 0.64
SNX17-201ENST00000233575 SLC7A9P82251 487 aa19.07■□□□□ 0.64
SNX17-201ENST00000233575 GLIPR1L2Q4G1C9 344 aa19.07■□□□□ 0.64
SNX17-201ENST00000233575 UBAP2Q5T6F2 1119 aaKnown RBP19.07■□□□□ 0.64
SNX17-201ENST00000233575 GPR158Q5T848 1215 aa19.07■□□□□ 0.64
SNX17-201ENST00000233575 TXLNGYQ9BZA5 131 aa19.07■□□□□ 0.64
SNX17-201ENST00000233575 LMAN2LQ9H0V9 348 aa19.07■□□□□ 0.64
SNX17-201ENST00000233575 ZDHHC7Q9NXF8 308 aa19.07■□□□□ 0.64
SNX17-201ENST00000233575 PAK5Q9P286 719 aa19.07■□□□□ 0.64
SNX17-201ENST00000233575 CCL26Q9Y258 94 aa19.07■□□□□ 0.64
SNX17-201ENST00000233575 MYO18AQ92614 2054 aaKnown RBP19.07■□□□□ 0.64
SNX17-201ENST00000233575 C5orf60A6NFR6 353 aa19.07■□□□□ 0.64
SNX17-201ENST00000233575 GOLGA8MH3BSY2 632 aa19.07■□□□□ 0.64
SNX17-201ENST00000233575 NCAM2O15394 837 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms