RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 SPATA13Q96N96 652 aa14.03□□□□□ -0.16
NFKB1-201ENST00000226574 ELOVL4Q9GZR5 314 aa14.03□□□□□ -0.16
NFKB1-201ENST00000226574 EBF3Q9H4W6 596 aa14.03□□□□□ -0.16
NFKB1-201ENST00000226574 ETAA1Q9NY74 926 aa14.03□□□□□ -0.16
NFKB1-201ENST00000226574 HMGXB4Q9UGU5 601 aa14.03□□□□□ -0.16
NFKB1-201ENST00000226574 PAIP2BQ9ULR5 123 aaKnown RBP14.03□□□□□ -0.16
NFKB1-201ENST00000226574 SCAMP3O14828 347 aaKnown RBP14.02□□□□□ -0.16
NFKB1-201ENST00000226574 ATP6V1B2P21281 511 aa14.02□□□□□ -0.16
NFKB1-201ENST00000226574 TMED10P49755 219 aaKnown RBP14.02□□□□□ -0.16
NFKB1-201ENST00000226574 SV2CQ496J9 727 aa14.02□□□□□ -0.16
NFKB1-201ENST00000226574 ZRANB3Q5FWF4 1079 aa14.02□□□□□ -0.16
NFKB1-201ENST00000226574 DLK2Q6UY11 383 aa14.02□□□□□ -0.16
NFKB1-201ENST00000226574 BANPQ8N9N5 519 aa14.02□□□□□ -0.16
NFKB1-201ENST00000226574 P2RY11Q96G91 374 aa14.02□□□□□ -0.16
NFKB1-201ENST00000226574 PIDD1Q9HB75 910 aa14.02□□□□□ -0.16
NFKB1-201ENST00000226574 CDHR5Q9HBB8 845 aa14.02□□□□□ -0.16
NFKB1-201ENST00000226574 DDX43Q9NXZ2 648 aaKnown RBP14.02□□□□□ -0.16
NFKB1-201ENST00000226574 AP4B1Q9Y6B7 739 aa14.02□□□□□ -0.16
NFKB1-201ENST00000226574 MED1Q15648 1581 aaPredicted RBP14.02□□□□□ -0.16
NFKB1-201ENST00000226574 BCL9LQ86UU0 1499 aa14.02□□□□□ -0.16
NFKB1-201ENST00000226574 M0R3G1 203 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 CLOCKO15516 846 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 TM7SF2O76062 418 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 RECQL4O94761 1208 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 RPL14P50914 215 aaKnown RBP14.02□□□□□ -0.17
NFKB1-201ENST00000226574 HADHBP55084 474 aaKnown RBP14.02□□□□□ -0.17
NFKB1-201ENST00000226574 RALGDSQ12967 914 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 NOMO1Q15155 1222 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 PMF1Q6P1K2 205 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 MOB2Q70IA6 237 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 CHSY1Q86X52 802 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 MICU2Q8IYU8 434 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 RMND5BQ96G75 393 aaPredicted RBP14.02□□□□□ -0.17
NFKB1-201ENST00000226574 CEP19Q96LK0 163 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 PHF12Q96QT6 1004 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 TMEM216Q9P0N5 145 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 KIF17Q9P2E2 1029 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 MYO18AQ92614 2054 aaKnown RBP14.02□□□□□ -0.17
NFKB1-201ENST00000226574 SIN3BO75182 1162 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 TNFAIP8O95379 198 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 ERCC2P18074 760 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 NFKB1P19838 968 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 GMPRP36959 345 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 CA9Q16790 459 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 SLC39A4Q6P5W5 647 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 ABHD15Q6UXT9 468 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 MPP5Q8N3R9 675 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 CLEC4DQ8WXI8 215 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 C17orf80Q9BSJ5 609 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 SLC4A5Q9BY07 1137 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 POMKQ9H5K3 350 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 RERGLQ9H628 205 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 PDGFCQ9NRA1 345 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 PPM1HQ9ULR3 514 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 ZNF541Q9H0D2 1346 aa14.02□□□□□ -0.17
NFKB1-201ENST00000226574 DUOX1Q9NRD9 1551 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 POMCP01189 267 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 AMHP03971 560 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 VCLP18206 1134 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 XPAP23025 273 aaPredicted RBP14.01□□□□□ -0.17
NFKB1-201ENST00000226574 ADARP55265 1226 aaKnown RBP14.01□□□□□ -0.17
NFKB1-201ENST00000226574 ACVR2BQ13705 512 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 LAMC2Q13753 1193 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 BNIPLQ7Z465 357 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 ANKS1BQ7Z6G8 1248 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 XYLT1Q86Y38 959 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 MYO1HQ8N1T3 1032 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 SNX19Q92543 992 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 BORCS6Q96GS4 357 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 DDX28Q9NUL7 540 aaKnown RBP14.01□□□□□ -0.17
NFKB1-201ENST00000226574 XPR1Q9UBH6 696 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 PNMA8BQ9ULN7 279 aaPredicted RBP14.01□□□□□ -0.17
NFKB1-201ENST00000226574 FAM50BQ9Y247 325 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 COQ4Q9Y3A0 265 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 TELO2Q9Y4R8 837 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 ITGB6P18564 788 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 ADCYAP1R1P41586 468 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 DDX39BQ13838 428 aaKnown RBP14.01□□□□□ -0.17
NFKB1-201ENST00000226574 MAPK11Q15759 364 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 C6orf52Q5T4I8 152 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 SAPCD2Q86UD0 394 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 FBXW8Q8N3Y1 598 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 C1orf127Q8N9H9 656 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 DNAJB14Q8TBM8 379 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 C18orf25Q96B23 403 aaPredicted RBP14.01□□□□□ -0.17
NFKB1-201ENST00000226574 MOCOSQ96EN8 888 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 TSPAN17Q96FV3 270 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 TKTL2Q9H0I9 626 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 GID8Q9NWU2 228 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 NDUFA13Q9P0J0 144 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 CROTQ9UKG9 612 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 KATNA1O75449 491 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 ANXA9O76027 345 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 MTA2O94776 668 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 METTL18O95568 372 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 OLIG2Q13516 323 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 CCDC85BQ15834 202 aaPredicted RBP14.01□□□□□ -0.17
NFKB1-201ENST00000226574 ILDR2Q71H61 639 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 RNF145Q96MT1 663 aa14.01□□□□□ -0.17
NFKB1-201ENST00000226574 SEPT5Q99719 369 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms