RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 TTLL3Q9Y4R7 772 aa17.85■□□□□ 0.45
VRK1-201ENST00000216639 PCDHA11Q9Y5I1 949 aa17.85■□□□□ 0.45
VRK1-201ENST00000216639 HS3ST4Q9Y661 456 aa17.85■□□□□ 0.45
VRK1-201ENST00000216639 E9PAM4 449 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 F5H423 210 aaPredicted RBP17.84■□□□□ 0.45
VRK1-201ENST00000216639 PRKCHP24723 683 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 MLLT6P55198 1093 aaPredicted RBP17.84■□□□□ 0.45
VRK1-201ENST00000216639 IL9RQ01113 521 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 EFEMP1Q12805 493 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 TAF10Q12962 218 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 DUSP4Q13115 394 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 MTA1Q13330 715 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 NUGGCQ68CJ6 796 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 KIAA1841Q6NSI8 718 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 PRSS55Q6UWB4 352 aaPredicted RBP17.84■□□□□ 0.45
VRK1-201ENST00000216639 RSPO2Q6UXX9 243 aaPredicted RBP17.84■□□□□ 0.45
VRK1-201ENST00000216639 UNC5AQ6ZN44 842 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 TAS1R1Q7RTX1 841 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 CTAGE3PQ8IX95 158 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 GPR152Q8TDT2 470 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 BCL7CQ8WUZ0 217 aaPredicted RBP17.84■□□□□ 0.45
VRK1-201ENST00000216639 CELF6Q96J87 481 aaKnown RBP17.84■□□□□ 0.45
VRK1-201ENST00000216639 TSGA13Q96PP4 275 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 ZNF317Q96PQ6 595 aaPredicted RBP17.84■□□□□ 0.45
VRK1-201ENST00000216639 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.84■□□□□ 0.45
VRK1-201ENST00000216639 MTRRQ9UBK8 725 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 GGA2Q9UJY4 613 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 NEU3Q9UQ49 428 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 BACE2Q9Y5Z0 518 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 TET1Q8NFU7 2136 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 DFFAO00273 331 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 PSMD3O43242 534 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 SOAT2O75908 522 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 VIMP08670 466 aaKnown RBP17.84■□□□□ 0.45
VRK1-201ENST00000216639 DRD4P21917 467 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 GRIA1P42261 906 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 TUFMP49411 452 aaKnown RBP17.84■□□□□ 0.45
VRK1-201ENST00000216639 TRIP4Q15650 581 aaPredicted RBP17.84■□□□□ 0.45
VRK1-201ENST00000216639 PSMD5Q16401 504 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 SLC8B1Q6J4K2 584 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 CASC4Q6P4E1 433 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 CYS1Q717R9 158 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 LRRC49Q8IUZ0 686 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 CKAP2Q8WWK9 683 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 IGSF21Q96ID5 467 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 AGAP3Q96P47 875 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 CDK5RAP1Q96SZ6 601 aaKnown RBP17.84■□□□□ 0.45
VRK1-201ENST00000216639 MARCH2Q9P0N8 246 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 ZNF180Q9UJW8 692 aa17.84■□□□□ 0.45
VRK1-201ENST00000216639 MICAL3Q7RTP6 2002 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 ABHD14A-ACY1A0A1B0GW23 586 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 AP3B1O00203 1094 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 ZBTB24O43167 697 aaPredicted RBP17.83■□□□□ 0.44
VRK1-201ENST00000216639 SPAG7O75391 227 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 SUN1O94901 812 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 AP2A1O95782 977 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 MT-ND3P03897 115 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 CLTBP09497 229 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 KRT4P19013 534 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 CA4P22748 312 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 KPNA1P52294 538 aaPredicted RBP17.83■□□□□ 0.44
VRK1-201ENST00000216639 MPP2Q14168 576 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 C10orf120Q5SQS8 335 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 SPOUT1Q5T280 376 aaKnown RBP17.83■□□□□ 0.44
VRK1-201ENST00000216639 TIGD7Q6NT04 549 aaPredicted RBP17.83■□□□□ 0.44
VRK1-201ENST00000216639 CNPY4Q8N129 248 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 C4orf33Q8N1A6 199 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 MPP5Q8N3R9 675 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 PPM1NQ8N819 430 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 RTL3Q8N8U3 475 aaKnown RBP17.83■□□□□ 0.44
VRK1-201ENST00000216639 DEPDC1BQ8WUY9 529 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 BTN2A3PQ96KV6 586 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 TEKT5Q96M29 485 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 PPP1R2P1Q96PQ5 205 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 CWH43Q9H720 699 aa17.83■□□□□ 0.44
VRK1-201ENST00000216639 A0A1W2PPM1 405 aa17.82■□□□□ 0.44
VRK1-201ENST00000216639 ARHGAP42A6NI28 874 aa17.82■□□□□ 0.44
VRK1-201ENST00000216639 WASH4PA8MWX3 477 aa17.82■□□□□ 0.44
VRK1-201ENST00000216639 KRT37O76014 449 aa17.82■□□□□ 0.44
VRK1-201ENST00000216639 ZWINTO95229 277 aa17.82■□□□□ 0.44
VRK1-201ENST00000216639 VNN2O95498 520 aa17.82■□□□□ 0.44
VRK1-201ENST00000216639 PGAM1P18669 254 aa17.82■□□□□ 0.44
VRK1-201ENST00000216639 SESN2P58004 480 aaPredicted RBP17.82■□□□□ 0.44
VRK1-201ENST00000216639 ZBTB17Q13105 803 aa17.82■□□□□ 0.44
VRK1-201ENST00000216639 SPARCL1Q14515 664 aa17.82■□□□□ 0.44
VRK1-201ENST00000216639 SEPT7Q16181 437 aaKnown RBP17.82■□□□□ 0.44
VRK1-201ENST00000216639 TTC39BQ5VTQ0 682 aaPredicted RBP17.82■□□□□ 0.44
VRK1-201ENST00000216639 STEAP4Q687X5 459 aa17.82■□□□□ 0.44
VRK1-201ENST00000216639 MAGEB18Q96M61 343 aa17.82■□□□□ 0.44
VRK1-201ENST00000216639 CRISPLD1Q9H336 500 aa17.82■□□□□ 0.44
VRK1-201ENST00000216639 KIF9Q9HAQ2 790 aa17.82■□□□□ 0.44
VRK1-201ENST00000216639 SAMD15Q9P1V8 674 aa17.82■□□□□ 0.44
VRK1-201ENST00000216639 WDR27A2RRH5 827 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 CARNS1A5YM72 827 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 SLC38A8A6NNN8 435 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 EFEMP2O95967 443 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 JCHAINP01591 159 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 MGAT1P26572 445 aa17.81■□□□□ 0.44
VRK1-201ENST00000216639 PRPF39Q86UA1 669 aaKnown RBP17.81■□□□□ 0.44
VRK1-201ENST00000216639 ARHGAP12Q8IWW6 846 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms