RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 CCDC26Q8TAB7 109 aa20.77■□□□□ 0.92
RHBDD3-201ENST00000216085 RBM41Q96IZ5 413 aaKnown RBP20.77■□□□□ 0.92
RHBDD3-201ENST00000216085 NELL2Q99435 816 aa20.77■□□□□ 0.92
RHBDD3-201ENST00000216085 KLHL11Q9NVR0 708 aa20.77■□□□□ 0.92
RHBDD3-201ENST00000216085 TMEM248Q9NWD8 314 aa20.77■□□□□ 0.92
RHBDD3-201ENST00000216085 KIAA1522Q9P206 1035 aaPredicted RBP20.77■□□□□ 0.92
RHBDD3-201ENST00000216085 COL4A3Q01955 1670 aa20.77■□□□□ 0.92
RHBDD3-201ENST00000216085 FTCDO95954 541 aa20.77■□□□□ 0.91
RHBDD3-201ENST00000216085 DRD1P21728 446 aa20.77■□□□□ 0.91
RHBDD3-201ENST00000216085 CTNNA2P26232 953 aa20.77■□□□□ 0.91
RHBDD3-201ENST00000216085 CETN2P41208 172 aa20.77■□□□□ 0.91
RHBDD3-201ENST00000216085 GRIA2P42262 883 aa20.77■□□□□ 0.91
RHBDD3-201ENST00000216085 STARD6P59095 220 aa20.77■□□□□ 0.91
RHBDD3-201ENST00000216085 KDSRQ06136 332 aa20.77■□□□□ 0.91
RHBDD3-201ENST00000216085 SLC12A1Q13621 1099 aa20.77■□□□□ 0.91
RHBDD3-201ENST00000216085 E2F5Q15329 346 aa20.77■□□□□ 0.91
RHBDD3-201ENST00000216085 ALFQ53S48 1182 aa20.77■□□□□ 0.91
RHBDD3-201ENST00000216085 C12orf40Q86WS4 652 aa20.77■□□□□ 0.91
RHBDD3-201ENST00000216085 RTL3Q8N8U3 475 aaKnown RBP20.77■□□□□ 0.91
RHBDD3-201ENST00000216085 WFIKKN2Q8TEU8 576 aa20.77■□□□□ 0.91
RHBDD3-201ENST00000216085 MAGEB5Q9BZ81 275 aa20.77■□□□□ 0.91
RHBDD3-201ENST00000216085 FBXO10Q9UK96 956 aa20.77■□□□□ 0.91
RHBDD3-201ENST00000216085 SLC27A6Q9Y2P4 619 aa20.77■□□□□ 0.91
RHBDD3-201ENST00000216085 PCDHA3Q9Y5H8 950 aa20.77■□□□□ 0.91
RHBDD3-201ENST00000216085 MYOFQ9NZM1 2061 aa20.76■□□□□ 0.91
RHBDD3-201ENST00000216085 F5P12259 2224 aa20.76■□□□□ 0.91
RHBDD3-201ENST00000216085 STK25O00506 426 aa20.76■□□□□ 0.91
RHBDD3-201ENST00000216085 CNTN5O94779 1100 aa20.76■□□□□ 0.91
RHBDD3-201ENST00000216085 ZRANB2O95218 330 aaKnown RBP eCLIP20.76■□□□□ 0.91
RHBDD3-201ENST00000216085 RHOCP08134 193 aa20.76■□□□□ 0.91
RHBDD3-201ENST00000216085 KDELR1P24390 212 aa20.76■□□□□ 0.91
RHBDD3-201ENST00000216085 ETFBP38117 255 aa20.76■□□□□ 0.91
RHBDD3-201ENST00000216085 RWDD2BP57060 319 aa20.76■□□□□ 0.91
RHBDD3-201ENST00000216085 PON2Q15165 354 aa20.76■□□□□ 0.91
RHBDD3-201ENST00000216085 ATP13A4Q4VNC1 1196 aa20.76■□□□□ 0.91
RHBDD3-201ENST00000216085 AHI1Q8N157 1196 aa20.76■□□□□ 0.91
RHBDD3-201ENST00000216085 FAM71BQ8TC56 605 aa20.76■□□□□ 0.91
RHBDD3-201ENST00000216085 CSPG4P5Q96PW8 444 aa20.76■□□□□ 0.91
RHBDD3-201ENST00000216085 MAK16Q9BXY0 300 aaKnown RBP20.76■□□□□ 0.91
RHBDD3-201ENST00000216085 CWC15Q9P013 229 aaKnown RBP20.76■□□□□ 0.91
RHBDD3-201ENST00000216085 KRBA1A5PL33 1030 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 TBC1D3BA6NDS4 549 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 ZNF487B1APH4 448 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 KAT7O95251 611 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 SLC6A11P48066 632 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 GALK1P51570 392 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 IRAK1P51617 712 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 DPYSL3Q14195 570 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 TXNDC11Q6PKC3 985 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 ZNF783Q6ZMS7 281 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 TRIM67Q6ZTA4 783 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 CCDC50Q8IVM0 306 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 RCOR2Q8IZ40 523 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 TERB1Q8NA31 727 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 EXD1Q8NHP7 514 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 CHFRQ96EP1 664 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 ABCB8Q9NUT2 735 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 GGA2Q9UJY4 613 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 TBC1D30Q9Y2I9 924 aa20.75■□□□□ 0.91
RHBDD3-201ENST00000216085 KANSL1LA0AUZ9 987 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 WASH4PA8MWX3 477 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 TNFRSF10AO00220 468 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 PABPC1P11940 636 aaKnown RBP20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 SERPINB6P35237 376 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 LRRC32Q14392 662 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 DMC1Q14565 340 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 EIF4HQ15056 248 aaKnown RBP20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 TMEM196Q5HYL7 178 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 NLRP14Q86W24 1093 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 MUC3BQ9H195 1237 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 TBC1D17Q9HA65 648 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 PRDM16Q9HAZ2 1276 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 KCND1Q9NSA2 647 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 NEU3Q9UQ49 428 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 NCAM2O15394 837 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 HLA-FP30511 346 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 ARSEP51690 589 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 DPYSQ14117 519 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 UBXN2BQ14CS0 331 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 FBXO43Q4G163 708 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 IER5LQ5T953 404 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 TMCO3Q6UWJ1 677 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 LZTR1Q8N653 840 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 UCMAQ8WVF2 138 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 RAPGEF5Q92565 580 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 TSC1Q92574 1164 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 KRT35Q92764 455 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 P2RY11Q96G91 374 aa20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 NDRG2Q9UN36 371 aaKnown RBP20.74■□□□□ 0.91
RHBDD3-201ENST00000216085 KIAA1549LQ6ZVL6 1849 aa20.73■□□□□ 0.91
RHBDD3-201ENST00000216085 ILVBLA1L0T0 632 aa20.73■□□□□ 0.91
RHBDD3-201ENST00000216085 PI4K2BG5E9Z4 385 aa20.73■□□□□ 0.91
RHBDD3-201ENST00000216085 RAMP2O60895 175 aa20.73■□□□□ 0.91
RHBDD3-201ENST00000216085 CISD3P0C7P0 127 aa20.73■□□□□ 0.91
RHBDD3-201ENST00000216085 ERCC2P18074 760 aa20.73■□□□□ 0.91
RHBDD3-201ENST00000216085 COPS2P61201 443 aa20.73■□□□□ 0.91
RHBDD3-201ENST00000216085 LMAN2Q12907 356 aa20.73■□□□□ 0.91
RHBDD3-201ENST00000216085 RPS6KA1Q15418 735 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms