RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ERCC2P18074 760 aa18.01■□□□□ 0.47
PHGDH-230ENST00000641927 FCARP24071 287 aa18.01■□□□□ 0.47
PHGDH-230ENST00000641927 IRAK1P51617 712 aa18.01■□□□□ 0.47
PHGDH-230ENST00000641927 DPYSQ14117 519 aa18.01■□□□□ 0.47
PHGDH-230ENST00000641927 TPGS1Q6ZTW0 290 aa18.01■□□□□ 0.47
PHGDH-230ENST00000641927 TFAP2DQ7Z6R9 452 aa18.01■□□□□ 0.47
PHGDH-230ENST00000641927 ZNF683Q8IZ20 524 aa18.01■□□□□ 0.47
PHGDH-230ENST00000641927 PQLC3Q8N755 202 aa18.01■□□□□ 0.47
PHGDH-230ENST00000641927 TDRD5Q8NAT2 981 aaKnown RBP18.01■□□□□ 0.47
PHGDH-230ENST00000641927 E2F7Q96AV8 911 aa18.01■□□□□ 0.47
PHGDH-230ENST00000641927 PRICKLE1Q96MT3 831 aaPredicted RBP18.01■□□□□ 0.47
PHGDH-230ENST00000641927 THG1LQ9NWX6 298 aaKnown RBP18.01■□□□□ 0.47
PHGDH-230ENST00000641927 DUS2Q9NX74 493 aaKnown RBP18.01■□□□□ 0.47
PHGDH-230ENST00000641927 PPARGC1AQ9UBK2 798 aaKnown RBP18.01■□□□□ 0.47
PHGDH-230ENST00000641927 RNF14Q9UBS8 474 aa18.01■□□□□ 0.47
PHGDH-230ENST00000641927 EFR3BQ9Y2G0 817 aa18.01■□□□□ 0.47
PHGDH-230ENST00000641927 FGF10O15520 208 aaPredicted RBP18■□□□□ 0.47
PHGDH-230ENST00000641927 RPS24P62847 133 aaKnown RBP18■□□□□ 0.47
PHGDH-230ENST00000641927 WHAMMP3Q1A5X7 153 aa18■□□□□ 0.47
PHGDH-230ENST00000641927 PARM1Q6UWI2 310 aa18■□□□□ 0.47
PHGDH-230ENST00000641927 TMCO3Q6UWJ1 677 aa18■□□□□ 0.47
PHGDH-230ENST00000641927 TMA16Q96EY4 203 aaKnown RBP18■□□□□ 0.47
PHGDH-230ENST00000641927 AP1M1Q9BXS5 423 aa18■□□□□ 0.47
PHGDH-230ENST00000641927 LINC00597Q9H2U6 94 aa18■□□□□ 0.47
PHGDH-230ENST00000641927 ETNK2Q9NVF9 386 aa18■□□□□ 0.47
PHGDH-230ENST00000641927 OBP2AQ9NY56 170 aa18■□□□□ 0.47
PHGDH-230ENST00000641927 TTC7AQ9ULT0 858 aaPredicted RBP18■□□□□ 0.47
PHGDH-230ENST00000641927 NEU3Q9UQ49 428 aa18■□□□□ 0.47
PHGDH-230ENST00000641927 MFHAS1Q9Y4C4 1052 aa18■□□□□ 0.47
PHGDH-230ENST00000641927 IGLV3-10A0A075B6K4 115 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 KRIT1O00522 736 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 CNTN5O94779 1100 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 ZFXP17010 805 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-230ENST00000641927 HOXC13P31276 330 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 IFNAR2P48551 515 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 SGSHP51688 502 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 CKAP4Q07065 602 aaKnown RBP17.99■□□□□ 0.47
PHGDH-230ENST00000641927 LEXMQ3ZCV2 418 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 ALFQ53S48 1182 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 PTCRAQ6ISU1 281 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-230ENST00000641927 C1orf228Q6PIY5 440 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 BBS12Q6ZW61 710 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 MTSS1LQ765P7 747 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 FAM217AQ8IXS0 508 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 YAF2Q8IY57 180 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 CPXM2Q8N436 756 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 HJURPQ8NCD3 748 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-230ENST00000641927 DDI1Q8WTU0 396 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 MAIP1Q8WWC4 291 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 FGF14Q92915 247 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 ZFYVE19Q96K21 471 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 RPGRIP1Q96KN7 1286 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 EPS15L1Q9UBC2 864 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 SAE1Q9UBE0 346 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-230ENST00000641927 HEY1Q9Y5J3 304 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 DOCK8Q8NF50 2099 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 DRGXA6NNA5 263 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 PDE2AO00408 941 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-230ENST00000641927 DCLK1O15075 740 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 TBL1XO60907 577 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 CYBBP04839 570 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 RHOQP17081 205 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 TFF2Q03403 129 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 KLF1Q13351 362 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-230ENST00000641927 GRM2Q14416 872 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 MPPE1Q53F39 396 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 TTC39BQ5VTQ0 682 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-230ENST00000641927 NCBP2-AS2Q69YL0 99 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 SLC9A4Q6AI14 798 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 TRIM68Q6AZZ1 485 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 VITQ6UXI7 678 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 NPNTQ6UXI9 565 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 PLD5Q8N7P1 536 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 OSCP1Q8WVF1 389 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 P3H4Q92791 437 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 ELSPBP1Q96BH3 223 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 FAM118BQ9BPY3 351 aa17.99■□□□□ 0.47
PHGDH-230ENST00000641927 GOLGA6L10A0A0M3HER8 536 aa17.98■□□□□ 0.47
PHGDH-230ENST00000641927 MAP3K6O95382 1288 aa17.98■□□□□ 0.47
PHGDH-230ENST00000641927 ANO4Q32M45 955 aa17.98■□□□□ 0.47
PHGDH-230ENST00000641927 ARTNQ5T4W7 220 aa17.98■□□□□ 0.47
PHGDH-230ENST00000641927 MFSD6LQ8IWD5 586 aa17.98■□□□□ 0.47
PHGDH-230ENST00000641927 RTL3Q8N8U3 475 aaKnown RBP17.98■□□□□ 0.47
PHGDH-230ENST00000641927 OTUB2Q96DC9 234 aa17.98■□□□□ 0.47
PHGDH-230ENST00000641927 PHF7Q9BWX1 381 aaPredicted RBP17.98■□□□□ 0.47
PHGDH-230ENST00000641927 PLA2G2FQ9BZM2 168 aa17.98■□□□□ 0.47
PHGDH-230ENST00000641927 PLK2Q9NYY3 685 aa17.98■□□□□ 0.47
PHGDH-230ENST00000641927 FAM50BQ9Y247 325 aa17.98■□□□□ 0.47
PHGDH-230ENST00000641927 NR2E1Q9Y466 385 aa17.98■□□□□ 0.47
PHGDH-230ENST00000641927 NUMBLQ9Y6R0 609 aa17.98■□□□□ 0.47
PHGDH-230ENST00000641927 C2CD4DB7Z1M9 353 aa17.97■□□□□ 0.47
PHGDH-230ENST00000641927 TGM2P21980 687 aa17.97■□□□□ 0.47
PHGDH-230ENST00000641927 OR1E1P30953 314 aa17.97■□□□□ 0.47
PHGDH-230ENST00000641927 SERPINB6P35237 376 aa17.97■□□□□ 0.47
PHGDH-230ENST00000641927 CDH4P55283 916 aa17.97■□□□□ 0.47
PHGDH-230ENST00000641927 GBE1Q04446 702 aa17.97■□□□□ 0.47
PHGDH-230ENST00000641927 SMAD2Q15796 467 aaKnown RBP17.97■□□□□ 0.47
PHGDH-230ENST00000641927 C5orf22Q49AR2 442 aa17.97■□□□□ 0.47
PHGDH-230ENST00000641927 TMEM25Q86YD3 366 aa17.97■□□□□ 0.47
PHGDH-230ENST00000641927 ADGRG2Q8IZP9 1017 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms