RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 CCDC195A0A1B0GUA6 201 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 CA12O43570 354 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 ZNF623O75123 536 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 ALDH3A1P30838 453 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 AIF1P55008 147 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 SREBF2Q12772 1141 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 METTL23Q86XA0 190 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 NDUFAF2Q8N183 169 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 OR52K1Q8NGK4 314 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 PKMYT1Q99640 499 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 FERMT1Q9BQL6 677 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 ACBD6Q9BR61 282 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 IGSF9Q9P2J2 1179 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 BAIAP2L1Q9UHR4 511 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 HAO1Q9UJM8 370 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 PSAT1Q9Y617 370 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 C2orf71A6NGG8 1288 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 C2CD2LO14523 706 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 ZBTB24O43167 697 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-229ENST00000641891 ALDH1A2O94788 518 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 ELNP15502 786 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 CXCR3P49682 368 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 ZBTB17Q13105 803 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 TAF1BQ53T94 588 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-229ENST00000641891 ZNF449Q6P9G9 518 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 MTDHQ86UE4 582 aaKnown RBP17.42■□□□□ 0.38
PHGDH-229ENST00000641891 MTBPQ96DY7 904 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 OR12D3Q9UGF7 316 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 LRIG2O94898 1065 aa17.41■□□□□ 0.38
PHGDH-229ENST00000641891 CBX6O95503 412 aa17.41■□□□□ 0.38
PHGDH-229ENST00000641891 PGAM1P18669 254 aa17.41■□□□□ 0.38
PHGDH-229ENST00000641891 PPIDQ08752 370 aaKnown RBP17.41■□□□□ 0.38
PHGDH-229ENST00000641891 ARL13BQ3SXY8 428 aa17.41■□□□□ 0.38
PHGDH-229ENST00000641891 MARK2Q7KZI7 788 aaKnown RBP17.41■□□□□ 0.38
PHGDH-229ENST00000641891 RSPH1Q8WYR4 309 aa17.41■□□□□ 0.38
PHGDH-229ENST00000641891 CELF6Q96J87 481 aaKnown RBP17.41■□□□□ 0.38
PHGDH-229ENST00000641891 KCNK13Q9HB14 408 aa17.41■□□□□ 0.38
PHGDH-229ENST00000641891 MRPL42Q9Y6G3 142 aaKnown RBP17.41■□□□□ 0.38
PHGDH-229ENST00000641891 B4GALT3O60512 393 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 CYP11A1P05108 521 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 F7P08709 466 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-229ENST00000641891 T-ENOLP0DO92 83 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 EPHB2P29323 1055 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 CD68P34810 354 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-229ENST00000641891 SKIV2L2P42285 1042 aaKnown RBP17.4■□□□□ 0.38
PHGDH-229ENST00000641891 PGFP49763 221 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 SERPINB9P50453 376 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 RAB27AP51159 221 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 GRIK3Q13003 919 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 PM20D1Q6GTS8 502 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 CCSAPQ6IQ19 270 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-229ENST00000641891 PACS1Q6VY07 963 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 KLHDC9Q8NEP7 349 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 DQX1Q8TE96 717 aaKnown RBP17.4■□□□□ 0.38
PHGDH-229ENST00000641891 TRIM55Q9BYV6 548 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 ZNF395Q9H8N7 513 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-229ENST00000641891 NOD2Q9HC29 1040 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 DMAP1Q9NPF5 467 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-229ENST00000641891 TXLNGQ9NUQ3 528 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 MKS1Q9NXB0 559 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 ZFP69BQ9UJL9 534 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 MAGED2Q9UNF1 606 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-229ENST00000641891 HTTP42858 3142 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 M0QZQ0 153 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 ERVK-10P10266 1014 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 HCAR3P49019 387 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 NKX3-2P78367 333 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 TUSC3Q13454 348 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 ICE2Q659A1 982 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 OVOS1Q6IE37 1185 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 PDZD4Q76G19 769 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-229ENST00000641891 RNF34Q969K3 372 aa17.4■□□□□ 0.38
PHGDH-229ENST00000641891 PRR11Q96HE9 360 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-229ENST00000641891 FCRL3Q96P31 734 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-229ENST00000641891 COL4A4P53420 1690 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-229ENST00000641891 F9P00740 461 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 OR4Q2P0C623 313 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 PRKAR2AP13861 404 aaKnown RBP17.39■□□□□ 0.37
PHGDH-229ENST00000641891 IRX4P78413 519 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 GALNT2Q10471 571 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 CYS1Q717R9 158 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 RASSF3Q86WH2 238 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 STKLD1Q8NE28 680 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 UTP4Q969X6 686 aaKnown RBP17.39■□□□□ 0.37
PHGDH-229ENST00000641891 EPAS1Q99814 870 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 MLPHQ9BV36 600 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-229ENST00000641891 TMEM120AQ9BXJ8 343 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 RRN3Q9NYV6 651 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 SHROOM3Q8TF72 1996 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 NLRC5Q86WI3 1866 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 TPP1O14773 563 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 ALDOAP04075 364 aaKnown RBP17.39■□□□□ 0.37
PHGDH-229ENST00000641891 SRGAP2BP0DMP2 458 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 CRHR1P34998 444 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 GMPRP36959 345 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 GARSP41250 739 aaKnown RBP17.39■□□□□ 0.37
PHGDH-229ENST00000641891 TM4SF4P48230 202 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 CHI3L2Q15782 390 aa17.39■□□□□ 0.37
PHGDH-229ENST00000641891 TRIM71Q2Q1W2 868 aaKnown RBP17.39■□□□□ 0.37
PHGDH-229ENST00000641891 C16orf46Q6P387 395 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms