RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 RAB33AQ14088 237 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 DPYSQ14117 519 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 PPP2R5DQ14738 602 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 PDK1Q15118 436 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 RASA2Q15283 850 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 SLC45A4Q5BKX6 768 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 PLPP4Q5VZY2 271 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 HEATR6Q6AI08 1181 aaKnown RBP9.12□□□□□ -0.95
PHGDH-219ENST00000641513 ATP6V0D2Q8N8Y2 350 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 PDZD8Q8NEN9 1154 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 TFB1MQ8WVM0 346 aaKnown RBP9.12□□□□□ -0.95
PHGDH-219ENST00000641513 CEP295NLQ96MC4 621 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 XPO6Q96QU8 1125 aaKnown RBP9.12□□□□□ -0.95
PHGDH-219ENST00000641513 HAPLN3Q96S86 360 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 UBE2OQ9C0C9 1292 aaKnown RBP9.12□□□□□ -0.95
PHGDH-219ENST00000641513 ZBP1Q9H171 429 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 OSBPL2Q9H1P3 480 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 CCSER2Q9H7U1 834 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.12□□□□□ -0.95
PHGDH-219ENST00000641513 TMEM51Q9NW97 253 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 ARHGEF38Q9NXL2 777 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 CLIC5Q9NZA1 410 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 IL37Q9NZH6 218 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 DTLQ9NZJ0 730 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 TRPM5Q9NZQ8 1165 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 SEPT10Q9P0V9 454 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 LGALS13Q9UHV8 139 aa9.12□□□□□ -0.95
PHGDH-219ENST00000641513 NOVA2Q9UNW9 492 aaKnown RBP9.12□□□□□ -0.95
PHGDH-219ENST00000641513 ATG2AQ2TAZ0 1938 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 FAM92AA1XBS5 289 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 BCLAF3A2AJT9 711 aaKnown RBP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 LCHNA4D1U4 455 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 HACD1B0YJ81 288 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 GOLGA8MH3BSY2 632 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 I6L893 689 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 SMAPO00193 183 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 RASGRF2O14827 1237 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 PPP1R12AO14974 1030 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 DCLK1O15075 740 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 TLR5O60602 858 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 CNPP09543 421 aaKnown RBP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 CTSAP10619 480 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 SERPINB6P35237 376 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 CHKAP35790 457 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 ATP5C1P36542 298 aaKnown RBP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 HCAR3P49019 387 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 TUBP50607 506 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 NRLP54845 237 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 NR1H3Q13133 447 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 CBLBQ13191 982 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 SEMA3BQ13214 749 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 ITIH4Q14624 930 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 PAFAH1B3Q15102 231 aaKnown RBP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 TRIP4Q15650 581 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 TTC31Q49AM3 519 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 LACTB2Q53H82 288 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 FAM182AQ5T1J6 154 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 HECTD3Q5T447 861 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 GKAP1Q5VSY0 366 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 HIBCHQ6NVY1 386 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 ARHGEF18Q6ZSZ5 1173 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 PPIL6Q8IXY8 311 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 C10orf67Q8IYJ2 551 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 OR2W6PQ8NHA6 318 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 PHOSPHO2Q8TCD6 241 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 MICAL1Q8TDZ2 1067 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 TBC1D31Q96DN5 1066 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 FCRL2Q96LA5 508 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 PWWP2AQ96N64 755 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 QKIQ96PU8 341 aaKnown RBP eCLIP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 CDK5RAP1Q96SZ6 601 aaKnown RBP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 TTLL2Q9BWV7 592 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 EMILIN2Q9BXX0 1053 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 NSRP1Q9H0G5 558 aaKnown RBP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 CENPHQ9H3R5 247 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 CATSPERBQ9H7T0 1116 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 ALG13Q9NP73 1137 aaKnown RBP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 FNIP2Q9P278 1114 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 PAK5Q9P286 719 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 HSFX1Q9UBD0 423 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 XPO7Q9UIA9 1087 aaKnown RBP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 DNMT3LQ9UJW3 386 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 INSL5Q9Y5Q6 135 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 HS3ST4Q9Y661 456 aa9.11□□□□□ -0.95
PHGDH-219ENST00000641513 TNRC18O15417 2968 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-219ENST00000641513 KCNU1A8MYU2 1149 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 E7EVH7 732 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 E9PAM4 449 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 DFFAO00273 331 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 TP73O15350 636 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 TTC4O95801 387 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 LRG1P02750 347 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 ADH1AP07327 375 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 GSTA1P08263 222 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 DRD4P21917 467 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 HPDP32754 393 aaPredicted RBP9.1□□□□□ -0.95
PHGDH-219ENST00000641513 BMPR1AP36894 532 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 KPNA1P52294 538 aaPredicted RBP9.1□□□□□ -0.95
PHGDH-219ENST00000641513 SLC18A1P54219 525 aa9.1□□□□□ -0.95
PHGDH-219ENST00000641513 COG7P83436 770 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms