RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 OLFML1Q6UWY5 402 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 TMEM35BQ8NCS4 154 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 BTBD9Q96Q07 612 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 KCNK16Q96T55 309 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 RPAP3Q9H6T3 665 aaPredicted RBP14.1□□□□□ -0.15
SCARB2-227ENST00000640957 VPS51Q9UID3 782 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 USP18Q9UMW8 372 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 WNT10BO00744 389 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 KLF11O14901 512 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 ATE1O95260 518 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 ATXN1P54253 815 aaKnown RBP14.1□□□□□ -0.15
SCARB2-227ENST00000640957 RELAQ04206 551 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 CXCL9Q07325 125 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 ITGADQ13349 1161 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 BTG3Q14201 252 aaPredicted RBP14.1□□□□□ -0.15
SCARB2-227ENST00000640957 MYBPC2Q14324 1141 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 TGFBIQ15582 683 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 HADHQ16836 314 aaKnown RBP14.1□□□□□ -0.15
SCARB2-227ENST00000640957 SNRNP48Q6IEG0 339 aaKnown RBP14.1□□□□□ -0.15
SCARB2-227ENST00000640957 RPS27LQ71UM5 84 aaKnown RBP14.1□□□□□ -0.15
SCARB2-227ENST00000640957 SYTL5Q8TDW5 730 aaPredicted RBP14.1□□□□□ -0.15
SCARB2-227ENST00000640957 C12orf43Q96C57 262 aaKnown RBP14.1□□□□□ -0.15
SCARB2-227ENST00000640957 ZFRQ96KR1 1074 aaKnown RBP14.1□□□□□ -0.15
SCARB2-227ENST00000640957 APBA2Q99767 749 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 IMPG2Q9BZV3 1241 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 NRDE2Q9H7Z3 1164 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 PCDH12Q9NPG4 1184 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 TIMMDC1Q9NPL8 285 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 COQ6Q9Y2Z9 468 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 V9GYQ6 96 aa14.1□□□□□ -0.15
SCARB2-227ENST00000640957 DENRO43583 198 aaKnown RBP14.09□□□□□ -0.15
SCARB2-227ENST00000640957 TIPRLO75663 272 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 C1QAP02745 245 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 MT-ND1P03886 318 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 PIK3R1P27986 724 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 RCVRNP35243 200 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 NME5P56597 212 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 PIGHQ14442 188 aaPredicted RBP14.09□□□□□ -0.15
SCARB2-227ENST00000640957 CYP2A13Q16696 494 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 FAM102AQ5T9C2 384 aaPredicted RBP14.09□□□□□ -0.15
SCARB2-227ENST00000640957 ADGRG6Q86SQ4 1221 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 USP37Q86T82 979 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 MCF2L2Q86YR7 1114 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 PQLC3Q8N755 202 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 JADE3Q92613 823 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 SLC35B4Q969S0 331 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 CCDC97Q96F63 343 aaPredicted RBP14.09□□□□□ -0.15
SCARB2-227ENST00000640957 PPP1R10Q96QC0 940 aaKnown RBP14.09□□□□□ -0.15
SCARB2-227ENST00000640957 POLR3FQ9H1D9 316 aaPredicted RBP14.09□□□□□ -0.15
SCARB2-227ENST00000640957 FAIMQ9NVQ4 179 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 KCND2Q9NZV8 630 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 EDN1P05305 212 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 AVPR1AP37288 418 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 TMED10P49755 219 aaKnown RBP14.09□□□□□ -0.15
SCARB2-227ENST00000640957 OXCT1P55809 520 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 KCNJ11Q14654 390 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 CA9Q16790 459 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 PERM1Q5SV97 790 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 BNC2Q6ZN30 1099 aaPredicted RBP14.09□□□□□ -0.15
SCARB2-227ENST00000640957 PRR23BQ6ZRT6 265 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 SLC15A3Q8IY34 581 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 PARP8Q8N3A8 854 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 PPCSQ9HAB8 311 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 CIDEBQ9UHD4 219 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 RIMS3Q9UJD0 308 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 ITGA11Q9UKX5 1188 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 RIPK3Q9Y572 518 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 SYNJ2BP-COX16A0A087WUM0 186 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 SLC26A4O43511 780 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 PLIN3O60664 434 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 GSTT2P0CG29 244 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 GSTT2BP0CG30 244 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 MAPTP10636 758 aaKnown RBP14.09□□□□□ -0.15
SCARB2-227ENST00000640957 SULT2A1Q06520 285 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 MTA1Q13330 715 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 TMEM26Q6ZUK4 368 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 RIT2Q99578 217 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 AGO4Q9HCK5 861 aaKnown RBP14.09□□□□□ -0.15
SCARB2-227ENST00000640957 XPNPEP3Q9NQH7 507 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 COX16Q9P0S2 106 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 HMGXB4Q9UGU5 601 aa14.09□□□□□ -0.15
SCARB2-227ENST00000640957 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.09□□□□□ -0.15
SCARB2-227ENST00000640957 A6NL46 340 aa14.08□□□□□ -0.16
SCARB2-227ENST00000640957 ABCE1P61221 599 aaKnown RBP14.08□□□□□ -0.16
SCARB2-227ENST00000640957 MGAT5BQ3V5L5 792 aa14.08□□□□□ -0.16
SCARB2-227ENST00000640957 NBPF12Q5TAG4 269 aaPredicted RBP14.08□□□□□ -0.16
SCARB2-227ENST00000640957 C12orf56Q8IXR9 622 aa14.08□□□□□ -0.16
SCARB2-227ENST00000640957 ACVR1CQ8NER5 493 aa14.08□□□□□ -0.16
SCARB2-227ENST00000640957 DEPTORQ8TB45 409 aa14.08□□□□□ -0.16
SCARB2-227ENST00000640957 TMC2Q8TDI7 906 aa14.08□□□□□ -0.16
SCARB2-227ENST00000640957 KBTBD7Q8WVZ9 684 aa14.08□□□□□ -0.16
SCARB2-227ENST00000640957 ACO2Q99798 780 aaKnown RBP14.08□□□□□ -0.16
SCARB2-227ENST00000640957 TCF7L2Q9NQB0 619 aa14.08□□□□□ -0.16
SCARB2-227ENST00000640957 AURKCQ9UQB9 309 aa14.08□□□□□ -0.16
SCARB2-227ENST00000640957 DNAH12Q6ZR08 3092 aa14.08□□□□□ -0.16
SCARB2-227ENST00000640957 C1orf232A0A0U1RR37 186 aa14.08□□□□□ -0.16
SCARB2-227ENST00000640957 TMEM247A6NEH6 219 aa14.08□□□□□ -0.16
SCARB2-227ENST00000640957 ERBB2P04626 1255 aa14.08□□□□□ -0.16
SCARB2-227ENST00000640957 CALB1P05937 261 aa14.08□□□□□ -0.16
SCARB2-227ENST00000640957 ZNF182P17025 639 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms