RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 ZNF180Q9UJW8 692 aa15.53■□□□□ 0.08
TRIM3-215ENST00000639856 ADAM28Q9UKQ2 775 aa15.53■□□□□ 0.08
TRIM3-215ENST00000639856 SF3B1O75533 1304 aaKnown RBP eCLIP15.53■□□□□ 0.083e-6■■■■■ 137.9
TRIM3-215ENST00000639856 A0A0A0MRY4 1105 aa15.53■□□□□ 0.08
TRIM3-215ENST00000639856 LPXNO60711 386 aa15.53■□□□□ 0.08
TRIM3-215ENST00000639856 APOEP02649 317 aa15.53■□□□□ 0.08
TRIM3-215ENST00000639856 ALADP13716 330 aa15.53■□□□□ 0.08
TRIM3-215ENST00000639856 CCDC15Q0P6D6 951 aa15.53■□□□□ 0.08
TRIM3-215ENST00000639856 TTC39BQ5VTQ0 682 aaPredicted RBP15.53■□□□□ 0.08
TRIM3-215ENST00000639856 FAM171A1Q5VUB5 890 aa15.53■□□□□ 0.08
TRIM3-215ENST00000639856 UNC5AQ6ZN44 842 aa15.53■□□□□ 0.08
TRIM3-215ENST00000639856 TMEM173Q86WV6 379 aaPredicted RBP15.53■□□□□ 0.08
TRIM3-215ENST00000639856 APOPT1Q96IL0 206 aa15.53■□□□□ 0.08
TRIM3-215ENST00000639856 SPATA13Q96N96 652 aa15.53■□□□□ 0.08
TRIM3-215ENST00000639856 SLC9A7Q96T83 725 aa15.53■□□□□ 0.08
TRIM3-215ENST00000639856 LGMNQ99538 433 aa15.53■□□□□ 0.08
TRIM3-215ENST00000639856 EBNA1BP2Q99848 306 aaKnown RBP15.53■□□□□ 0.08
TRIM3-215ENST00000639856 CRISPLD2Q9H0B8 497 aa15.53■□□□□ 0.08
TRIM3-215ENST00000639856 ZCWPW1Q9H0M4 648 aa15.53■□□□□ 0.08
TRIM3-215ENST00000639856 ABI2Q9NYB9 513 aaPredicted RBP15.53■□□□□ 0.08
TRIM3-215ENST00000639856 KIAA0100Q14667 2235 aaKnown RBP15.53■□□□□ 0.08
TRIM3-215ENST00000639856 MYO16Q9Y6X6 1858 aa15.52■□□□□ 0.08
TRIM3-215ENST00000639856 CFAP73A6NFT4 308 aa15.52■□□□□ 0.08
TRIM3-215ENST00000639856 TBKBP1A7MCY6 615 aa15.52■□□□□ 0.08
TRIM3-215ENST00000639856 CXorf49A8MYA2 514 aaPredicted RBP15.52■□□□□ 0.08
TRIM3-215ENST00000639856 I6L893 689 aaPredicted RBP15.52■□□□□ 0.08
TRIM3-215ENST00000639856 FAM155BO75949 473 aa15.52■□□□□ 0.08
TRIM3-215ENST00000639856 CXCL10P02778 98 aa15.52■□□□□ 0.08
TRIM3-215ENST00000639856 FDFT1P37268 417 aa15.52■□□□□ 0.08
TRIM3-215ENST00000639856 GRIK1P39086 918 aa15.52■□□□□ 0.08
TRIM3-215ENST00000639856 NCALDP61601 193 aa15.52■□□□□ 0.08
TRIM3-215ENST00000639856 CDK16Q00536 496 aa15.52■□□□□ 0.08
TRIM3-215ENST00000639856 NPAS4Q8IUM7 802 aa15.52■□□□□ 0.08
TRIM3-215ENST00000639856 SUGP1Q8IWZ8 645 aaKnown RBP15.52■□□□□ 0.08
TRIM3-215ENST00000639856 NR2E3Q9Y5X4 410 aa15.52■□□□□ 0.08
TRIM3-215ENST00000639856 USH1CQ9Y6N9 552 aa15.52■□□□□ 0.08
TRIM3-215ENST00000639856 VGLL3A8MV65 326 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 CREB3O43889 395 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 KRT37O76014 449 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 SNRPAP09012 282 aaKnown RBP15.52■□□□□ 0.07
TRIM3-215ENST00000639856 PYGBP11216 843 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 PGFP49763 221 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 NEK3P51956 506 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 SLC5A3P53794 718 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 AIF1P55008 147 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 SARNPP82979 210 aaKnown RBP15.52■□□□□ 0.07
TRIM3-215ENST00000639856 PRKD1Q15139 912 aaPredicted RBP15.52■□□□□ 0.07
TRIM3-215ENST00000639856 LGSNQ5TDP6 509 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 SDHAF4Q5VUM1 108 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 PM20D1Q6GTS8 502 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.52■□□□□ 0.07
TRIM3-215ENST00000639856 C4orf50Q6ZRC1 276 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 OTOAQ7RTW8 1153 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 MPP5Q8N3R9 675 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 GSDMBQ8TAX9 411 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 PGLYRP2Q96PD5 576 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 C12orf65Q9H3J6 166 aaKnown RBP15.52■□□□□ 0.07
TRIM3-215ENST00000639856 ECT2Q9H8V3 914 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 WDR6Q9NNW5 1121 aaKnown RBP15.52■□□□□ 0.07
TRIM3-215ENST00000639856 ATP11BQ9Y2G3 1177 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 MAD1L1Q9Y6D9 718 aa15.52■□□□□ 0.07
TRIM3-215ENST00000639856 COL4A4P53420 1690 aaPredicted RBP15.51■□□□□ 0.07
TRIM3-215ENST00000639856 DHRS4L1P0CG22 281 aa15.51■□□□□ 0.07
TRIM3-215ENST00000639856 GRIA1P42261 906 aa15.51■□□□□ 0.07
TRIM3-215ENST00000639856 ETV4P43268 484 aa15.51■□□□□ 0.07
TRIM3-215ENST00000639856 GLUD2P49448 558 aa15.51■□□□□ 0.07
TRIM3-215ENST00000639856 GPR15P49685 360 aa15.51■□□□□ 0.07
TRIM3-215ENST00000639856 PAFAH1B3Q15102 231 aaKnown RBP15.51■□□□□ 0.07
TRIM3-215ENST00000639856 PDK1Q15118 436 aa15.51■□□□□ 0.07
TRIM3-215ENST00000639856 BSPRYQ5W0U4 402 aa15.51■□□□□ 0.07
TRIM3-215ENST00000639856 DENND5BQ6ZUT9 1274 aa15.51■□□□□ 0.07
TRIM3-215ENST00000639856 SCN4BQ8IWT1 228 aa15.51■□□□□ 0.07
TRIM3-215ENST00000639856 TTC9BQ8N6N2 239 aa15.51■□□□□ 0.07
TRIM3-215ENST00000639856 ANKLE1Q8NAG6 615 aa15.51■□□□□ 0.07
TRIM3-215ENST00000639856 COLGALT1Q8NBJ5 622 aa15.51■□□□□ 0.07
TRIM3-215ENST00000639856 BCL7CQ8WUZ0 217 aaPredicted RBP15.51■□□□□ 0.07
TRIM3-215ENST00000639856 THOC1Q96FV9 657 aaKnown RBP15.51■□□□□ 0.07
TRIM3-215ENST00000639856 P2RY11Q96G91 374 aa15.51■□□□□ 0.07
TRIM3-215ENST00000639856 FERMT1Q9BQL6 677 aa15.51■□□□□ 0.07
TRIM3-215ENST00000639856 SMYD2Q9NRG4 433 aa15.51■□□□□ 0.07
TRIM3-215ENST00000639856 DDIT4Q9NX09 232 aa15.51■□□□□ 0.07
TRIM3-215ENST00000639856 WDR91A4D1P6 747 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 TRIM49D1C9J1S8 452 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 SYN3O14994 580 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 OPHN1O60890 802 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 STK10O94804 968 aaKnown RBP15.5■□□□□ 0.07
TRIM3-215ENST00000639856 UPP2O95045 317 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 MLNP12872 115 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 ADRA1BP35368 520 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 AP1B1Q10567 949 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 DPYSQ14117 519 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 CTXN3Q4LDR2 81 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 RFX8Q6ZV50 586 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 CHSY1Q86X52 802 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 NETO2Q8NC67 525 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 NTAN1Q96AB6 310 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 VWCEQ96DN2 955 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 ZNF333Q96JL9 665 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 PCDHA11Q9Y5I1 949 aa15.5■□□□□ 0.07
TRIM3-215ENST00000639856 FAM159BA6NKW6 160 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms