RNA–Protein interactions for RNA: ENST00000639002.1

CD44-239, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-239ENST00000639002 LACTBL1A8MY62 500 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 FOXO6A8MYZ6 492 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 PODXLO00592 558 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 ANXA6P08133 673 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 GAD2Q05329 585 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 CBFBQ13951 182 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 RAB30Q15771 203 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 MPEG1Q2M385 716 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 HMBOX1Q6NT76 420 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 WDR93Q6P2C0 686 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 ADHFE1Q8IWW8 467 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 SRFBP1Q8NEF9 429 aaKnown RBP4.7□□□□□ -1.66
CD44-239ENST00000639002 ATP2A3Q93084 1043 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 ZNF566Q969W8 418 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 URB1-AS1Q96HZ7 61 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 CLMNQ96JQ2 1002 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 TMEM204Q9BSN7 226 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 HTATIP2Q9BUP3 242 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 ARHGAP39Q9C0H5 1083 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 SLCO5A1Q9H2Y9 848 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 HELLSQ9NRZ9 838 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 FNIP2Q9P278 1114 aa4.7□□□□□ -1.66
CD44-239ENST00000639002 RASA4BC9J798 803 aa4.69□□□□□ -1.66
CD44-239ENST00000639002 MDM4O15151 490 aa4.69□□□□□ -1.66
CD44-239ENST00000639002 RASA4O43374 803 aa4.69□□□□□ -1.66
CD44-239ENST00000639002 HSPA7P48741 367 aa4.69□□□□□ -1.66
CD44-239ENST00000639002 RPL15P61313 204 aaKnown RBP4.69□□□□□ -1.66
CD44-239ENST00000639002 DGKKQ5KSL6 1271 aa4.69□□□□□ -1.66
CD44-239ENST00000639002 WASHC2DQ5SRD0 308 aa4.69□□□□□ -1.66
CD44-239ENST00000639002 LRIG3Q6UXM1 1119 aa4.69□□□□□ -1.66
CD44-239ENST00000639002 RTL10Q7L3V2 364 aa4.69□□□□□ -1.66
CD44-239ENST00000639002 MDGA2Q7Z553 956 aa4.69□□□□□ -1.66
CD44-239ENST00000639002 FAR2Q96K12 515 aa4.69□□□□□ -1.66
CD44-239ENST00000639002 C8orf48Q96LL4 319 aa4.69□□□□□ -1.66
CD44-239ENST00000639002 RBM38Q9H0Z9 239 aaKnown RBP4.69□□□□□ -1.66
CD44-239ENST00000639002 SIRT3Q9NTG7 399 aaPredicted RBP4.69□□□□□ -1.66
CD44-239ENST00000639002 SLC52A1Q9NWF4 448 aa4.69□□□□□ -1.66
CD44-239ENST00000639002 CHPF2Q9P2E5 772 aa4.69□□□□□ -1.66
CD44-239ENST00000639002 IGSF9Q9P2J2 1179 aa4.69□□□□□ -1.66
CD44-239ENST00000639002 CXorf65A6NEN9 183 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 PRSS44E7EML9 344 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 NEURL1O76050 574 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 ALDOCP09972 364 aaKnown RBP4.68□□□□□ -1.66
CD44-239ENST00000639002 KLRK1P26718 216 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 FAM3BP58499 235 aaPredicted RBP4.68□□□□□ -1.66
CD44-239ENST00000639002 TTC39AQ5SRH9 613 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 IZUMO3Q5VZ72 239 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 FBXO38Q6PIJ6 1188 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 C18orf65Q6ZTR6 163 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 TRILQ7L0X0 811 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 CTU1Q7Z7A3 348 aaKnown RBP4.68□□□□□ -1.66
CD44-239ENST00000639002 TRABD2AQ86V40 505 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 OR2C3Q8N628 320 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 PARD3BQ8TEW8 1205 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 IP6K1Q92551 441 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 LPAR1Q92633 364 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 CENPIQ92674 756 aaPredicted RBP4.68□□□□□ -1.66
CD44-239ENST00000639002 NEUROG1Q92886 237 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 MAGEH1Q9H213 219 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 SFXN1Q9H9B4 322 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 TM7SF3Q9NS93 570 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 INSL5Q9Y5Q6 135 aa4.68□□□□□ -1.66
CD44-239ENST00000639002 CYP3A7-CYP3A51PA0A087WV96 503 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 PLA2G6O60733 806 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 RPP40O75818 363 aaKnown RBP4.67□□□□□ -1.66
CD44-239ENST00000639002 NFATC1O95644 943 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 GLP2RO95838 553 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 CYP3A4P08684 503 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 CYP3A7P24462 503 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 CDC25AP30304 524 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 RFX2P48378 723 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 RFX5P48382 616 aaPredicted RBP4.67□□□□□ -1.66
CD44-239ENST00000639002 TAS2R50P59544 299 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 ARL6IP4Q66PJ3 421 aaKnown RBP4.67□□□□□ -1.66
CD44-239ENST00000639002 ANKRD40Q6AI12 368 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 KRTAP5-11Q6L8G4 156 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 RBM23Q86U06 439 aaKnown RBP4.67□□□□□ -1.66
CD44-239ENST00000639002 TTC30AQ86WT1 665 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 DCP1BQ8IZD4 617 aaKnown RBP4.67□□□□□ -1.66
CD44-239ENST00000639002 FBXL14Q8N1E6 418 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 IQCF1Q8N6M8 205 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 IPO4Q8TEX9 1081 aaKnown RBP4.67□□□□□ -1.66
CD44-239ENST00000639002 KIAA1191Q96A73 305 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 NTPCRQ9BSD7 190 aaKnown RBP4.67□□□□□ -1.66
CD44-239ENST00000639002 OSBPL5Q9H0X9 879 aaPredicted RBP4.67□□□□□ -1.66
CD44-239ENST00000639002 ISCUQ9H1K1 167 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 RAB21Q9UL25 225 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 SLC12A4Q9UP95 1085 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 PCDHGB2Q9Y5G2 931 aa4.67□□□□□ -1.66
CD44-239ENST00000639002 RPS10-NUDT3A0A1W2PQS6 291 aa4.66□□□□□ -1.66
CD44-239ENST00000639002 ANO9A1A5B4 782 aa4.66□□□□□ -1.66
CD44-239ENST00000639002 CLEC18AA5D8T8 446 aa4.66□□□□□ -1.66
CD44-239ENST00000639002 BECN2A8MW95 431 aa4.66□□□□□ -1.66
CD44-239ENST00000639002 KCNJ18B7U540 433 aa4.66□□□□□ -1.66
CD44-239ENST00000639002 HNRNPDLO14979 420 aaKnown RBP4.66□□□□□ -1.66
CD44-239ENST00000639002 TLE3Q04726 772 aa4.66□□□□□ -1.66
CD44-239ENST00000639002 LTBQ06643 244 aa4.66□□□□□ -1.66
CD44-239ENST00000639002 TRAF1Q13077 416 aa4.66□□□□□ -1.66
CD44-239ENST00000639002 LONRF1Q17RB8 773 aa4.66□□□□□ -1.66
CD44-239ENST00000639002 ENTPD8Q5MY95 495 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms