RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ITGA7Q13683 1181 aa22.09■■□□□ 1.13
CLN6-224ENST00000638076 KLHL29Q96CT2 875 aa22.09■■□□□ 1.13
CLN6-224ENST00000638076 EPAS1Q99814 870 aa22.09■■□□□ 1.13
CLN6-224ENST00000638076 SYBUQ9NX95 663 aa22.09■■□□□ 1.13
CLN6-224ENST00000638076 NCAM2O15394 837 aa22.09■■□□□ 1.13
CLN6-224ENST00000638076 DCTN3O75935 186 aa22.09■■□□□ 1.13
CLN6-224ENST00000638076 PGAM1P18669 254 aa22.09■■□□□ 1.13
CLN6-224ENST00000638076 EPHB2P29323 1055 aa22.09■■□□□ 1.13
CLN6-224ENST00000638076 SMC1BQ8NDV3 1235 aa22.09■■□□□ 1.13
CLN6-224ENST00000638076 SCAMP5Q8TAC9 235 aa22.09■■□□□ 1.13
CLN6-224ENST00000638076 AGAP3Q96P47 875 aa22.09■■□□□ 1.13
CLN6-224ENST00000638076 TDRD15B5MCY1 1934 aaKnown RBP22.08■■□□□ 1.13
CLN6-224ENST00000638076 LRIG2O94898 1065 aa22.08■■□□□ 1.13
CLN6-224ENST00000638076 NQO1P15559 274 aaKnown RBP22.08■■□□□ 1.13
CLN6-224ENST00000638076 CST5P28325 142 aaPredicted RBP22.08■■□□□ 1.13
CLN6-224ENST00000638076 OLIG2Q13516 323 aa22.08■■□□□ 1.13
CLN6-224ENST00000638076 PLEKHG4Q58EX7 1191 aa22.08■■□□□ 1.13
CLN6-224ENST00000638076 CCNJLQ8IV13 435 aa22.08■■□□□ 1.13
CLN6-224ENST00000638076 RNF34Q969K3 372 aa22.08■■□□□ 1.13
CLN6-224ENST00000638076 UROC1Q96N76 676 aa22.08■■□□□ 1.13
CLN6-224ENST00000638076 PCMTD2Q9NV79 361 aa22.08■■□□□ 1.13
CLN6-224ENST00000638076 SLC17A6Q9P2U8 582 aa22.08■■□□□ 1.13
CLN6-224ENST00000638076 TMEM88BA6NKF7 163 aa22.08■■□□□ 1.12
CLN6-224ENST00000638076 MGRN1O60291 552 aa22.08■■□□□ 1.12
CLN6-224ENST00000638076 SKIP12755 728 aa22.08■■□□□ 1.12
CLN6-224ENST00000638076 NIPAL4Q0D2K0 466 aa22.08■■□□□ 1.12
CLN6-224ENST00000638076 CRYMQ14894 314 aa22.08■■□□□ 1.12
CLN6-224ENST00000638076 TRIM71Q2Q1W2 868 aaKnown RBP22.08■■□□□ 1.12
CLN6-224ENST00000638076 PAXIP1Q6ZW49 1069 aaPredicted RBP22.08■■□□□ 1.12
CLN6-224ENST00000638076 SUGP1Q8IWZ8 645 aaKnown RBP22.08■■□□□ 1.12
CLN6-224ENST00000638076 THEM5Q8N1Q8 247 aa22.08■■□□□ 1.12
CLN6-224ENST00000638076 KIF2BQ8N4N8 673 aa22.08■■□□□ 1.12
CLN6-224ENST00000638076 PCSK9Q8NBP7 692 aaKnown RBP22.08■■□□□ 1.12
CLN6-224ENST00000638076 DQX1Q8TE96 717 aaKnown RBP22.08■■□□□ 1.12
CLN6-224ENST00000638076 GORASP1Q9BQQ3 440 aa22.08■■□□□ 1.12
CLN6-224ENST00000638076 DCTN4Q9UJW0 460 aa22.08■■□□□ 1.12
CLN6-224ENST00000638076 TRIM33Q9UPN9 1127 aa22.08■■□□□ 1.12
CLN6-224ENST00000638076 HTTP42858 3142 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 UNC5CO95185 931 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 CCNB1P14635 433 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 SKIV2L2P42285 1042 aaKnown RBP22.07■■□□□ 1.12
CLN6-224ENST00000638076 TSPY1Q01534 308 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 MARK2Q7KZI7 788 aaKnown RBP22.07■■□□□ 1.12
CLN6-224ENST00000638076 NLRP9Q7RTR0 991 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 NDUFAF2Q8N183 169 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 SCML4Q8N228 414 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 RFWD2Q8NHY2 731 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 CDKL2Q92772 493 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 HDAC11Q96DB2 347 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 SUSD3Q96L08 255 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 MKS1Q9NXB0 559 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 C2CD2LO14523 706 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 ZNF189O75820 626 aaPredicted RBP22.07■■□□□ 1.12
CLN6-224ENST00000638076 MX2P20592 715 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 SERPINB6P35237 376 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 MAPRE1Q15691 268 aaKnown RBP22.07■■□□□ 1.12
CLN6-224ENST00000638076 DCLRE1AQ6PJP8 1040 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 ASRGL1Q7L266 308 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 ZNF598Q86UK7 904 aaKnown RBP22.07■■□□□ 1.12
CLN6-224ENST00000638076 ARMC2Q8NEN0 867 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 OR52K1Q8NGK4 314 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 ZNF398Q8TD17 642 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 NAT9Q9BTE0 207 aa22.07■■□□□ 1.12
CLN6-224ENST00000638076 ZBTB24O43167 697 aaPredicted RBP22.06■■□□□ 1.12
CLN6-224ENST00000638076 CNTFP26441 200 aa22.06■■□□□ 1.12
CLN6-224ENST00000638076 GARSP41250 739 aaKnown RBP22.06■■□□□ 1.12
CLN6-224ENST00000638076 ZNF135P52742 658 aaPredicted RBP22.06■■□□□ 1.12
CLN6-224ENST00000638076 GALNT2Q10471 571 aa22.06■■□□□ 1.12
CLN6-224ENST00000638076 SNCBQ16143 134 aa22.06■■□□□ 1.12
CLN6-224ENST00000638076 FAM26DQ5JW98 314 aa22.06■■□□□ 1.12
CLN6-224ENST00000638076 MECRQ9BV79 373 aa22.06■■□□□ 1.12
CLN6-224ENST00000638076 TRIM55Q9BYV6 548 aa22.06■■□□□ 1.12
CLN6-224ENST00000638076 BRD8Q9H0E9 1235 aa22.06■■□□□ 1.12
CLN6-224ENST00000638076 USP12O75317 370 aa22.06■■□□□ 1.12
CLN6-224ENST00000638076 AP2A1O95782 977 aa22.06■■□□□ 1.12
CLN6-224ENST00000638076 ZBTB17Q13105 803 aa22.06■■□□□ 1.12
CLN6-224ENST00000638076 TIFABQ6ZNK6 161 aa22.06■■□□□ 1.12
CLN6-224ENST00000638076 ARHGEF3Q9NR81 526 aa22.06■■□□□ 1.12
CLN6-224ENST00000638076 TXLNGQ9NUQ3 528 aa22.06■■□□□ 1.12
CLN6-224ENST00000638076 RNF186Q9NXI6 227 aa22.06■■□□□ 1.12
CLN6-224ENST00000638076 PAX3P23760 479 aa22.05■■□□□ 1.12
CLN6-224ENST00000638076 SMAD1Q15797 465 aaKnown RBP22.05■■□□□ 1.12
CLN6-224ENST00000638076 CES3Q6UWW8 571 aa22.05■■□□□ 1.12
CLN6-224ENST00000638076 PACS1Q6VY07 963 aa22.05■■□□□ 1.12
CLN6-224ENST00000638076 SPATA2LQ8IUW3 424 aaPredicted RBP22.05■■□□□ 1.12
CLN6-224ENST00000638076 IL1RAPL1Q9NZN1 696 aa22.05■■□□□ 1.12
CLN6-224ENST00000638076 KANSL3Q9P2N6 904 aa22.05■■□□□ 1.12
CLN6-224ENST00000638076 A0A0G2JND7 137 aa22.05■■□□□ 1.12
CLN6-224ENST00000638076 KLF11O14901 512 aa22.05■■□□□ 1.12
CLN6-224ENST00000638076 POLBP06746 335 aa22.05■■□□□ 1.12
CLN6-224ENST00000638076 SRGAP2BP0DMP2 458 aa22.05■■□□□ 1.12
CLN6-224ENST00000638076 CD68P34810 354 aaPredicted RBP22.05■■□□□ 1.12
CLN6-224ENST00000638076 CRHR1P34998 444 aa22.05■■□□□ 1.12
CLN6-224ENST00000638076 CELF6Q96J87 481 aaKnown RBP22.05■■□□□ 1.12
CLN6-224ENST00000638076 PGLYRP2Q96PD5 576 aa22.05■■□□□ 1.12
CLN6-224ENST00000638076 RPS6KL1Q9Y6S9 549 aa22.05■■□□□ 1.12
CLN6-224ENST00000638076 MTSS1O43312 755 aa22.04■■□□□ 1.12
CLN6-224ENST00000638076 IGLV3-25P01717 112 aa22.04■■□□□ 1.12
CLN6-224ENST00000638076 TYMPP19971 482 aa22.04■■□□□ 1.12
CLN6-224ENST00000638076 TARSP26639 723 aaKnown RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms