RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 STKLD1Q8NE28 680 aa12.45□□□□□ -0.42
CLN8-212ENST00000637083 TRPV1Q8NER1 839 aa12.45□□□□□ -0.42
CLN8-212ENST00000637083 RFWD2Q8NHY2 731 aa12.45□□□□□ -0.42
CLN8-212ENST00000637083 HDAC11Q96DB2 347 aa12.45□□□□□ -0.42
CLN8-212ENST00000637083 COLEC11Q9BWP8 271 aa12.45□□□□□ -0.42
CLN8-212ENST00000637083 UPF3AQ9H1J1 476 aaKnown RBP12.45□□□□□ -0.42
CLN8-212ENST00000637083 FAM96AQ9H5X1 160 aa12.45□□□□□ -0.42
CLN8-212ENST00000637083 WDR6Q9NNW5 1121 aaKnown RBP12.45□□□□□ -0.42
CLN8-212ENST00000637083 ZFATQ9P243 1243 aa12.45□□□□□ -0.42
CLN8-212ENST00000637083 AP2A1O95782 977 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 CYP11A1P05108 521 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 BPGMP07738 259 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 DLDP09622 509 aaKnown RBP12.44□□□□□ -0.42
CLN8-212ENST00000637083 USP17L7P0C7H9 530 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 HTR7P34969 479 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 NPY2RP49146 381 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 CXCR3P49682 368 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 SCNN1GP51170 649 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 SREBF2Q12772 1141 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 KRT72Q14CN4 511 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 FAM91A1Q658Y4 838 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 GDF6Q6KF10 455 aaPredicted RBP12.44□□□□□ -0.42
CLN8-212ENST00000637083 RGMBQ6NW40 437 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 DCLRE1AQ6PJP8 1040 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 PACS1Q6VY07 963 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 AGMOQ6ZNB7 445 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 PPP1R14CQ8TAE6 165 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 CPNE1Q99829 537 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 WWP1Q9H0M0 922 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 DMAP1Q9NPF5 467 aaPredicted RBP12.44□□□□□ -0.42
CLN8-212ENST00000637083 ADAM28Q9UKQ2 775 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 UGT1A9O60656 530 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 CTSHP09668 335 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 CALB2P22676 271 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 IGFBP6P24592 240 aaPredicted RBP12.44□□□□□ -0.42
CLN8-212ENST00000637083 PTPN3P26045 913 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 GP5P40197 560 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 NKX3-2P78367 333 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 PDE1BQ01064 536 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 MGAT3Q09327 533 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 GRIK3Q13003 919 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 CHI3L2Q15782 390 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 PLEKHG4Q58EX7 1191 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 PM20D1Q6GTS8 502 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 CXCL17Q6UXB2 119 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 CDHR3Q6ZTQ4 885 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 RASSF3Q86WH2 238 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 ZMIZ2Q8NF64 920 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 SH3TC2Q8TF17 1288 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 ARNTL2Q8WYA1 636 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 RNF34Q969K3 372 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 CERS2Q96G23 380 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 NSL1Q96IY1 281 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 PPP1R2P1Q96PQ5 205 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 KCNK16Q96T55 309 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 UGT1A7Q9HAW7 530 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 UGT1A10Q9HAW8 530 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 UGT1A8Q9HAW9 530 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 MIOSQ9NXC5 875 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 NOP53Q9NZM5 478 aaKnown RBP12.44□□□□□ -0.42
CLN8-212ENST00000637083 TIMM13Q9Y5L4 95 aaPredicted RBP12.44□□□□□ -0.42
CLN8-212ENST00000637083 RPS6KL1Q9Y6S9 549 aa12.44□□□□□ -0.42
CLN8-212ENST00000637083 HHLA1C9JL84 531 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 CHRNA1P02708 482 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 T-ENOLP0DO92 83 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 MYL2P10916 166 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 CYBAP13498 195 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 SPRP35270 261 aaPredicted RBP12.43□□□□□ -0.42
CLN8-212ENST00000637083 GALNT2Q10471 571 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 BST1Q10588 318 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 STX3Q13277 289 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 TBCCQ15814 346 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 TIGD5Q53EQ6 642 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 WASHC2DQ5SRD0 308 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 BSPRYQ5W0U4 402 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 FAM171BQ6P995 826 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 LINC00523Q86TU6 105 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 DNAAF3Q8N9W5 541 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 LPPQ93052 612 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 MYLPFQ96A32 169 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 SKA1Q96BD8 255 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 SLC7A6OSQ96CW6 309 aaPredicted RBP12.43□□□□□ -0.42
CLN8-212ENST00000637083 TKTL2Q9H0I9 626 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 OSBPL2Q9H1P3 480 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 KCNK13Q9HB14 408 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 XPNPEP3Q9NQH7 507 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 TMPRSS4Q9NRS4 437 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 THAP1Q9NVV9 213 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 SYBUQ9NX95 663 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 OR12D3Q9UGF7 316 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 TRIM33Q9UPN9 1127 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 CEP350Q5VT06 3117 aa12.43□□□□□ -0.42
CLN8-212ENST00000637083 TRIP12Q14669 1992 aaPredicted RBP12.43□□□□□ -0.42
CLN8-212ENST00000637083 CASTOR2A6NHX0 329 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 MEIS3P2A8K0S8 358 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 USP1O94782 785 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 LMNAP02545 664 aaKnown RBP12.42□□□□□ -0.42
CLN8-212ENST00000637083 ITGA2BP08514 1039 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 SRGAP2BP0DMP2 458 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 FCGRTP55899 365 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms