RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 SP100P23497 879 aaPredicted RBP4.09□□□□□ -1.75
SCN1A-214ENST00000637038 ACAT1P24752 427 aaKnown RBP4.09□□□□□ -1.75
SCN1A-214ENST00000637038 SPRP35270 261 aaPredicted RBP4.09□□□□□ -1.75
SCN1A-214ENST00000637038 HADHAP40939 763 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 GABRB2P47870 512 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 TRPC1P48995 793 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 HMGCS2P54868 508 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 C19orf57Q0VDD7 668 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 KCNJ11Q14654 390 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 EFTUD2Q15029 972 aaKnown RBP eCLIP4.09□□□□□ -1.75
SCN1A-214ENST00000637038 PDK1Q15118 436 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 CDO1Q16878 200 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 CCDC153Q494R4 210 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 CDCA2Q69YH5 1023 aaPredicted RBP4.09□□□□□ -1.75
SCN1A-214ENST00000637038 IZUMO2Q6UXV1 221 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 SLC39A5Q6ZMH5 540 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 ACAD11Q709F0 780 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 ADGRG6Q86SQ4 1221 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 NLRP4Q96MN2 994 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 EBNA1BP2Q99848 306 aaKnown RBP4.09□□□□□ -1.75
SCN1A-214ENST00000637038 YIPF2Q9BWQ6 316 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 KLHL4Q9C0H6 718 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 CPA4Q9UI42 421 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 CPSF3Q9UKF6 684 aaKnown RBP4.09□□□□□ -1.75
SCN1A-214ENST00000637038 ARHGAP26Q9UNA1 814 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.09□□□□□ -1.75
SCN1A-214ENST00000637038 TNFSF13BQ9Y275 285 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 HBS1LQ9Y450 684 aaKnown RBP4.09□□□□□ -1.75
SCN1A-214ENST00000637038 NLRC5Q86WI3 1866 aa4.09□□□□□ -1.75
SCN1A-214ENST00000637038 PSMD3O43242 534 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 MTSS1O43312 755 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 TIMM44O43615 452 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 TMEM63AO94886 807 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 ATG7O95352 703 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 T-ENOLP0DO92 83 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 COL6A1P12109 1028 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 PGAM1P18669 254 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 PRKCHP24723 683 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 TCF7P36402 384 aaPredicted RBP4.09□□□□□ -1.76
SCN1A-214ENST00000637038 SERPINB8P50452 374 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 CCNHP51946 323 aaPredicted RBP4.09□□□□□ -1.76
SCN1A-214ENST00000637038 YWHAZP63104 245 aaKnown RBP4.09□□□□□ -1.76
SCN1A-214ENST00000637038 PRPSAP1Q14558 356 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 ADRM1Q16186 407 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 ANKRD20A4Q4UJ75 823 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 KHDC1Q4VXA5 237 aaKnown RBP4.09□□□□□ -1.76
SCN1A-214ENST00000637038 CWF19L1Q69YN2 538 aaKnown RBP4.09□□□□□ -1.76
SCN1A-214ENST00000637038 ZFP1Q6P2D0 407 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 XKR5Q6UX68 686 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 TIFABQ6ZNK6 161 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 TRIM67Q6ZTA4 783 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 SPATA24Q86W54 205 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 ULK2Q8IYT8 1036 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 GLIS1Q8NBF1 620 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 PIWIL2Q8TC59 973 aaKnown RBP4.09□□□□□ -1.76
SCN1A-214ENST00000637038 MZB1Q8WU39 189 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 GFM2Q969S9 779 aaKnown RBP4.09□□□□□ -1.76
SCN1A-214ENST00000637038 ELMO3Q96BJ8 720 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 HPDLQ96IR7 371 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 LRGUKQ96M69 825 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 ECSITQ9BQ95 431 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 ADAM33Q9BZ11 813 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 ASCC2Q9H1I8 757 aaPredicted RBP4.09□□□□□ -1.76
SCN1A-214ENST00000637038 IRAK4Q9NWZ3 460 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 TAS2R1Q9NYW7 299 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 BLOC1S6Q9UL45 172 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 TELO2Q9Y4R8 837 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 TEX264Q9Y6I9 313 aa4.09□□□□□ -1.76
SCN1A-214ENST00000637038 ATRXP46100 2492 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 FAM237BA0A1B0GVD1 139 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 SMIM31A0A1B0GVY4 71 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 ARHGAP10A1A4S6 786 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 DPPA5A6NC42 116 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 SLCO1B7G3V0H7 640 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 H0Y626 953 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 MDM4O15151 490 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 SEPT4O43236 478 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 LILRB3O75022 631 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 BANF1O75531 89 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 SKAP2O75563 359 aaPredicted RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 TRIM16O95361 564 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 POLBP06746 335 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 DLDP09622 509 aaKnown RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 KITP10721 976 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 AKR1A1P14550 325 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 NCF2P19878 526 aaPredicted RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 TYK2P29597 1187 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 ASPAP45381 313 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 RIPPLY3P57055 190 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 ACTR3P61158 418 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 OSTNP61366 133 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 OGDHQ02218 1023 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 GOLGA7BQ2TAP0 167 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 FASTKD1Q53R41 847 aaKnown RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 ACSBG2Q5FVE4 666 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 PPP6R3Q5H9R7 873 aaPredicted RBP4.08□□□□□ -1.76
SCN1A-214ENST00000637038 ZNF484Q5JVG2 852 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 ITPRIPL1Q6GPH6 555 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 RIPOR1Q6ZS17 1223 aa4.08□□□□□ -1.76
SCN1A-214ENST00000637038 CYS1Q717R9 158 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms