RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 VANGL2Q9ULK5 521 aa8.49□□□□□ -1.05
PNKP-226ENST00000636840 MMP17Q9ULZ9 603 aa8.49□□□□□ -1.05
PNKP-226ENST00000636840 HS3ST4Q9Y661 456 aa8.49□□□□□ -1.05
PNKP-226ENST00000636840 CCDC163A0A0D9SF12 145 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 EIF3CLB5ME19 914 aaKnown RBP8.48□□□□□ -1.05
PNKP-226ENST00000636840 AP5Z1O43299 807 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 CCP110O43303 1012 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 NRDCO43847 1150 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 PRPSAP2O60256 369 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 SYNCRIPO60506 623 aaKnown RBP8.48□□□□□ -1.05
PNKP-226ENST00000636840 LUC7L3O95232 432 aaKnown RBP8.48□□□□□ -1.05
PNKP-226ENST00000636840 GJB6O95452 261 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 APBB3O95704 486 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 PLEKP08567 350 aaPredicted RBP8.48□□□□□ -1.05
PNKP-226ENST00000636840 SP9P0CG40 484 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 HOXA6P31267 233 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 CNR2P34972 360 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 KIR2DL1P43626 348 aaPredicted RBP8.48□□□□□ -1.05
PNKP-226ENST00000636840 GALCP54803 685 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 KRT83P78385 493 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 HADHQ16836 314 aaKnown RBP8.48□□□□□ -1.05
PNKP-226ENST00000636840 BOLA3Q53S33 107 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 PPP1R15BQ5SWA1 713 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 C6orf118Q5T5N4 469 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 EMC10Q5UCC4 262 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 NAIF1Q69YI7 327 aaPredicted RBP8.48□□□□□ -1.05
PNKP-226ENST00000636840 Q6ZS52 159 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.48□□□□□ -1.05
PNKP-226ENST00000636840 SETD3Q86TU7 594 aaPredicted RBP8.48□□□□□ -1.05
PNKP-226ENST00000636840 CCAR2Q8N163 923 aaKnown RBP8.48□□□□□ -1.05
PNKP-226ENST00000636840 PGBD3Q8N328 593 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 TXLNBQ8N3L3 684 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 PHTF2Q8N3S3 785 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 CCDC33Q8N5R6 958 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 TSTD1Q8NFU3 115 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 ANP32BQ92688 251 aaKnown RBP8.48□□□□□ -1.05
PNKP-226ENST00000636840 NTAN1Q96AB6 310 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 PANX2Q96RD6 677 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 EIF3CQ99613 913 aaKnown RBP8.48□□□□□ -1.05
PNKP-226ENST00000636840 EPAS1Q99814 870 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 PRMT1Q99873 361 aaKnown RBP8.48□□□□□ -1.05
PNKP-226ENST00000636840 UVRAGQ9P2Y5 699 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 XPO7Q9UIA9 1087 aaKnown RBP8.48□□□□□ -1.05
PNKP-226ENST00000636840 RAB23Q9ULC3 237 aa8.48□□□□□ -1.05
PNKP-226ENST00000636840 KIF26AQ9ULI4 1882 aaPredicted RBP8.48□□□□□ -1.05
PNKP-226ENST00000636840 MYO18AQ92614 2054 aaKnown RBP8.48□□□□□ -1.05
PNKP-226ENST00000636840 ZNF318Q5VUA4 2279 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 CACNA1HO95180 2353 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 TCRBV5S1A1TA0A578 114 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 DRGXA6NNA5 263 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 PRRT4C9JH25 899 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 E9PAM4 449 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 TRIM24O15164 1050 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 DAPK3O43293 454 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 CYP1A2P05177 515 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 RHOCP08134 193 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 DLDP09622 509 aaKnown RBP8.47□□□□□ -1.05
PNKP-226ENST00000636840 TMEM253P0C7T8 217 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 HOXB2P14652 356 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 TFE3P19532 575 aaPredicted RBP8.47□□□□□ -1.05
PNKP-226ENST00000636840 CDC25BP30305 580 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 HLA-FP30511 346 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 OR1E1P30953 314 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 L1CAMP32004 1257 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 HTR7P34969 479 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 PCK1P35558 622 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 ETFBP38117 255 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 SSR1P43307 286 aaKnown RBP8.47□□□□□ -1.05
PNKP-226ENST00000636840 MAGEA1P43355 309 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 ZNF135P52742 658 aaPredicted RBP8.47□□□□□ -1.05
PNKP-226ENST00000636840 ATXN1P54253 815 aaKnown RBP8.47□□□□□ -1.05
PNKP-226ENST00000636840 HDAC4P56524 1084 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 SATB1Q01826 763 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 NRG1Q02297 640 aaPredicted RBP8.47□□□□□ -1.05
PNKP-226ENST00000636840 GFPT1Q06210 699 aaPredicted RBP8.47□□□□□ -1.05
PNKP-226ENST00000636840 SFSWAPQ12872 951 aaKnown RBP8.47□□□□□ -1.05
PNKP-226ENST00000636840 GAS6Q14393 721 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 CRY1Q16526 586 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 GEN1Q17RS7 908 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 C5orf22Q49AR2 442 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 FNDC3BQ53EP0 1204 aaKnown RBP8.47□□□□□ -1.05
PNKP-226ENST00000636840 USP39Q53GS9 565 aaKnown RBP8.47□□□□□ -1.05
PNKP-226ENST00000636840 ERMARDQ5T6L9 678 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 SH3PXD2AQ5TCZ1 1133 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 MBLAC2Q68D91 279 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 TRNP1Q6NT89 227 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 RWDD4Q6NW29 188 aaKnown RBP8.47□□□□□ -1.05
PNKP-226ENST00000636840 BNIPLQ7Z465 357 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 KIAA0907Q7Z7F0 614 aaPredicted RBP8.47□□□□□ -1.05
PNKP-226ENST00000636840 LONP2Q86WA8 852 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 PSTKQ8IV42 348 aaKnown RBP8.47□□□□□ -1.05
PNKP-226ENST00000636840 RHOT2Q8IXI1 618 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 ALLCQ8N6M5 410 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.47□□□□□ -1.05
PNKP-226ENST00000636840 TC2NQ8N9U0 490 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 IL17RCQ8NAC3 791 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 PRSS33Q8NF86 280 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 CHP1Q99653 195 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 NUP85Q9BW27 656 aa8.47□□□□□ -1.05
PNKP-226ENST00000636840 ZYG11BQ9C0D3 744 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms