RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 NEK11Q8NG66 645 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 SLC26A7Q8TE54 656 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 NRG4Q8WWG1 115 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 MRPS27Q92552 414 aaKnown RBP5.04□□□□□ -1.6
SDCBP-213ENST00000630925 THRSPQ92748 146 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 KAT2BQ92831 832 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 EXT2Q93063 718 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 EFHD2Q96C19 240 aaPredicted RBP5.04□□□□□ -1.6
SDCBP-213ENST00000630925 NMD3Q96D46 503 aaKnown RBP5.04□□□□□ -1.6
SDCBP-213ENST00000630925 LRRC46Q96FV0 321 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 MSANTD3Q96H12 275 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 IFT74Q96LB3 600 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 PNMA5Q96PV4 448 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 USP28Q96RU2 1077 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 FDXACB1Q9BRP7 624 aaPredicted RBP5.04□□□□□ -1.6
SDCBP-213ENST00000630925 RTKNQ9BST9 563 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 THUMPD2Q9BTF0 503 aaKnown RBP5.04□□□□□ -1.6
SDCBP-213ENST00000630925 PRDM12Q9H4Q4 367 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 CCDC86Q9H6F5 360 aaKnown RBP5.04□□□□□ -1.6
SDCBP-213ENST00000630925 GP6Q9HCN6 339 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 MBNL1Q9NR56 388 aaKnown RBP5.04□□□□□ -1.6
SDCBP-213ENST00000630925 KLHL14Q9P2G3 628 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 EXOC6BQ9Y2D4 811 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 MTO1Q9Y2Z2 717 aaKnown RBP5.04□□□□□ -1.6
SDCBP-213ENST00000630925 NFS1Q9Y697 457 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 MSH6P52701 1360 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 SPHKAPQ2M3C7 1700 aa5.04□□□□□ -1.6
SDCBP-213ENST00000630925 NKTRP30414 1462 aaKnown RBP5.04□□□□□ -1.6
SDCBP-213ENST00000630925 SAMD9LQ8IVG5 1584 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 MFSD2BA6NFX1 497 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 SPDYE3A6NKU9 549 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 GOLGA8SH3BPF8 625 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 HDAC3O15379 428 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 SLC16A6O15403 523 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 ZNF821O75541 412 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-213ENST00000630925 CLEC3AO75596 197 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 DGAT1O75907 488 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 RECQL5O94762 991 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-213ENST00000630925 AKR7A3O95154 331 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 DDAH2O95865 285 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 ARP10275 920 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 MTHFD2P13995 350 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 SELLP14151 372 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 TYRP14679 529 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 ENDOUP21128 410 aaKnown RBP5.03□□□□□ -1.6
SDCBP-213ENST00000630925 PTPN4P29074 926 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 WASP42768 502 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 BAG6P46379 1132 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 MFAP3P55082 362 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 NPEPPSP55786 919 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 MAP3K7CLP57077 242 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 PRAMEP78395 509 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 ARHGAP19Q14CB8 494 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 PCLAFQ15004 111 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 RPS6KA1Q15418 735 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 ZNF174Q15697 407 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 AANATQ16613 207 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 DBN1Q16643 649 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 LEXMQ3ZCV2 418 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 ANKRD20A4Q4UJ75 823 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 ANKRD20A8PQ5CZ79 823 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 EXOSC6Q5RKV6 272 aaKnown RBP5.03□□□□□ -1.6
SDCBP-213ENST00000630925 ANKRD20A2Q5SQ80 823 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 SPATA46Q5T0L3 261 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 RIPPLY2Q5TAB7 128 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 ANKRD20A1Q5TYW2 823 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 ANKRD20A3Q5VUR7 823 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 PSAPL1Q6NUJ1 521 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 MIS18BP1Q6P0N0 1132 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 MFSD7Q6UXD7 560 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 KIF6Q6ZMV9 814 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 CYFIP1Q7L576 1253 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 TAS2R42Q7RTR8 314 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 VASH2Q86V25 355 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 DNAAF5Q86Y56 855 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 ELMOD2Q8IZ81 293 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 GPBAR1Q8TDU6 330 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 DUSP19Q8WTR2 217 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 DDI1Q8WTU0 396 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 MIPEPQ99797 713 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 CACNG6Q9BXT2 260 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 MRPL37Q9BZE1 423 aaKnown RBP5.03□□□□□ -1.6
SDCBP-213ENST00000630925 GPR61Q9BZJ8 451 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 LSG1Q9H089 658 aaKnown RBP5.03□□□□□ -1.6
SDCBP-213ENST00000630925 SMG9Q9H0W8 520 aaKnown RBP5.03□□□□□ -1.6
SDCBP-213ENST00000630925 SH2D4AQ9H788 454 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 SYNDIG1Q9H7V2 258 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 AGPAT3Q9NRZ7 376 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 GPR27Q9NS67 375 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 CENPMQ9NSP4 180 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 MOCS1Q9NZB8 636 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 SPASTQ9UBP0 616 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 BAIAP2L1Q9UHR4 511 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 MSRAQ9UJ68 235 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 TUBE1Q9UJT0 475 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 ANGPTL2Q9UKU9 493 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 TRPC5Q9UL62 973 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-213ENST00000630925 TBC1D30Q9Y2I9 924 aa5.03□□□□□ -1.6
SDCBP-213ENST00000630925 R3HDM2Q9Y2K5 976 aaKnown RBP5.03□□□□□ -1.6
SDCBP-213ENST00000630925 PCDHB1Q9Y5F3 818 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms