RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 SERPINA1P01009 418 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 H2AFXP16104 143 aaPredicted RBP9.11□□□□□ -0.95
GABRB3-216ENST00000628124 HOXB6P17509 224 aaKnown RBP9.11□□□□□ -0.95
GABRB3-216ENST00000628124 CDK7P50613 346 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 MAPK11Q15759 364 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 C5orf22Q49AR2 442 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 SHC4Q6S5L8 630 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 ABRAXAS1Q6UWZ7 409 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 ARMC8Q8IUR7 673 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 ATL1Q8WXF7 558 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 MYDGFQ969H8 173 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 PPP1R16AQ96I34 528 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 PAFAH2Q99487 392 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 FAM192AQ9GZU8 254 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.11□□□□□ -0.95
GABRB3-216ENST00000628124 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.11□□□□□ -0.95
GABRB3-216ENST00000628124 IRGMA1A4Y4 181 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 CBX4O00257 560 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 MRASO14807 208 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 CATP04040 527 aaKnown RBP9.11□□□□□ -0.95
GABRB3-216ENST00000628124 S100A1P23297 94 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 RPA1P27694 616 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 HNRNPH1P31943 449 aaKnown RBP9.11□□□□□ -0.95
GABRB3-216ENST00000628124 OTUD3Q5T2D3 398 aaPredicted RBP9.11□□□□□ -0.95
GABRB3-216ENST00000628124 CLVS1Q8IUQ0 354 aaPredicted RBP9.11□□□□□ -0.95
GABRB3-216ENST00000628124 PEX5LQ8IYB4 626 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 C8orf59Q8N0T1 100 aaPredicted RBP9.11□□□□□ -0.95
GABRB3-216ENST00000628124 SRBD1Q8N5C6 995 aaKnown RBP9.11□□□□□ -0.95
GABRB3-216ENST00000628124 UXTQ9UBK9 157 aaPredicted RBP9.11□□□□□ -0.95
GABRB3-216ENST00000628124 TRHDEQ9UKU6 1024 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 VANGL2Q9ULK5 521 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 METP08581 1390 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 NMT2O60551 498 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 HOXC6P09630 235 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 TYMPP19971 482 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 ME2P23368 584 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 HSD17B3P37058 310 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 THPOP40225 353 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 KCNJ1P48048 391 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 ALDH3A2P51648 485 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 TMEM62Q0P6H9 643 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 EFEMP1Q12805 493 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 FASTKQ14296 549 aaKnown RBP9.11□□□□□ -0.95
GABRB3-216ENST00000628124 FAM171BQ6P995 826 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 SYT12Q8IV01 421 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 ADGRF2Q8IZF7 708 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 DEFB107AQ8IZN7 70 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 SAMD3Q8N6K7 520 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 METTL6Q8TCB7 284 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 HNRNPLLQ8WVV9 542 aaKnown RBP9.11□□□□□ -0.95
GABRB3-216ENST00000628124 BHMTQ93088 406 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 ZNF512BQ96KM6 892 aaPredicted RBP9.11□□□□□ -0.95
GABRB3-216ENST00000628124 RNF145Q96MT1 663 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 VCPKMTQ9H867 229 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 NEUROD4Q9HD90 331 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 NT5MQ9NPB1 228 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 MTMR4Q9NYA4 1195 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 AP4E1Q9UPM8 1137 aa9.11□□□□□ -0.95
GABRB3-216ENST00000628124 CYB561D2O14569 222 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 MSH4O15457 936 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 XYLBO75191 536 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 KHDRBS3O75525 346 aaKnown RBP9.1□□□□□ -0.95
GABRB3-216ENST00000628124 BMP7P18075 431 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 CCR1P32246 355 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 GRB14Q14449 540 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 BICRALQ6AI39 1079 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 RNF44Q7L0R7 432 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 MARCH10Q8NA82 808 aaPredicted RBP9.1□□□□□ -0.95
GABRB3-216ENST00000628124 CSGALNACT1Q8TDX6 532 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 FAM129BQ96TA1 746 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 CHCHD6Q9BRQ6 235 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 RSPH9Q9H1X1 276 aaPredicted RBP9.1□□□□□ -0.95
GABRB3-216ENST00000628124 PRDM16Q9HAZ2 1276 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 CYLDQ9NQC7 956 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 PTGFRNQ9P2B2 879 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 USP18Q9UMW8 372 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 NPHP3-ACAD11A0A0J9YXS1 232 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 FAM92AA1XBS5 289 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 CTSEP14091 401 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 GP5P40197 560 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 FRG1Q14331 258 aaKnown RBP9.1□□□□□ -0.95
GABRB3-216ENST00000628124 LPCAT1Q8NF37 534 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 PIGBQ92521 554 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 SLC4A9Q96Q91 983 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 CHP1Q99653 195 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 PHF20Q9BVI0 1012 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 DCLK3Q9C098 648 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 SLC39A8Q9C0K1 460 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 CNOT7Q9UIV1 285 aaKnown RBP9.1□□□□□ -0.95
GABRB3-216ENST00000628124 PCDHGA3Q9Y5H0 932 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 LYVE1Q9Y5Y7 322 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 WDR62O43379 1518 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 CES2O00748 559 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 IDH3BO43837 385 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 MYBP10242 640 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 CLK2P49760 499 aaKnown RBP9.1□□□□□ -0.95
GABRB3-216ENST00000628124 RAB27AP51159 221 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 NEK3P51956 506 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 THOP1P52888 689 aa9.1□□□□□ -0.95
GABRB3-216ENST00000628124 CACNA2D1P54289 1103 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms