RNA–Protein interactions for RNA: ENST00000624930.1

SMG6-IT1-201, SMG6 intronic transcript 1, humanhuman

BASIC

Gene SMG6-IT1, Length 374 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-IT1-201ENST00000624930 PSMC3IPQ9P2W1 217 aaPredicted RBP10.12□□□□□ -0.79
SMG6-IT1-201ENST00000624930 HBS1LQ9Y450 684 aaKnown RBP10.12□□□□□ -0.79
SMG6-IT1-201ENST00000624930 TANC1Q9C0D5 1861 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 SYNJ2BP-COX16A0A087WUM0 186 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 MAGEB16A2A368 324 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 GMNCA6NCL1 334 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 SDR42E2A6NKP2 422 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 DRGXA6NNA5 263 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 PRPF4O43172 522 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 ALDH1A2O94788 518 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 C1QAP02745 245 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 SOD2P04179 222 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 APRTP07741 180 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 CPB1P15086 417 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 RHOQP17081 205 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 IBSPP21815 317 aaPredicted RBP10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 PTPN3P26045 913 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 HPDP32754 393 aaPredicted RBP10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 ELK3P41970 407 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 GATMP50440 423 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 TUBP50607 506 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 ATP1A2P50993 1020 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 ATN1P54259 1190 aaPredicted RBP10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 TBX4P57082 545 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 GUCY1A3Q02108 690 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 CREMQ03060 361 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 AP1B1Q10567 949 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 NAB1Q13506 487 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 TIGD7Q6NT04 549 aaPredicted RBP10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 RSPO2Q6UXX9 243 aaPredicted RBP10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 ZNF534Q76KX8 674 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 DDX53Q86TM3 631 aaKnown RBP10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 TRABD2AQ86V40 505 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 CCDC117Q8IWD4 279 aaPredicted RBP10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 ZNF683Q8IZ20 524 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 ZNF567Q8N184 647 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 SLC39A11Q8N1S5 342 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 RTL3Q8N8U3 475 aaKnown RBP10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 ZNF461Q8TAF7 563 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 UHMK1Q8TAS1 419 aaKnown RBP10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 BCL7CQ8WUZ0 217 aaPredicted RBP10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 TTC17Q96AE7 1141 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 TRMT2BQ96GJ1 504 aaKnown RBP10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 SGSM3Q96HU1 749 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 BTN2A3PQ96KV6 586 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 TEKT5Q96M29 485 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 ZNF558Q96NG5 402 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 XPO6Q96QU8 1125 aaKnown RBP10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 DNAJC17Q9NVM6 304 aaKnown RBP10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 OSER1Q9NX31 292 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 COX16Q9P0S2 106 aa10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 SMG5Q9UPR3 1016 aaKnown RBP10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.11□□□□□ -0.79
SMG6-IT1-201ENST00000624930 SLC38A8A6NNN8 435 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 GOLGA8MH3BSY2 632 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 MATN3O15232 486 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 FAM107AO95990 144 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 APOEP02649 317 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 CSH1P0DML2 217 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 CSH2P0DML3 217 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 CNTFP26441 200 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 PPM1AP35813 382 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 SLCO1A2P46721 670 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 NPY2RP49146 381 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 PGFP49763 221 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 USP46P62068 366 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 GAD2Q05329 585 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 IFRD2Q12894 506 aaPredicted RBP10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 TAF10Q12962 218 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 DNAJC3Q13217 504 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 RAB33AQ14088 237 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 PSMD5Q16401 504 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 ZSCAN26Q16670 478 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 MGAT5BQ3V5L5 792 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 LGSNQ5TDP6 509 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 KCTD11Q693B1 232 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 TAS1R1Q7RTX1 841 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 PID1Q7Z2X4 250 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 NLRP14Q86W24 1093 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 ARHGAP12Q8IWW6 846 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 TMEM199Q8N511 208 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 NPWQ8N729 165 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 CCNYQ8ND76 341 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 FBF1Q8TES7 1133 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 SLC44A1Q8WWI5 657 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 FBXO32Q969P5 355 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 IL12RB2Q99665 862 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 PPP1R12CQ9BZL4 782 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 GBA3Q9H227 469 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 PRDM5Q9NQX1 630 aaPredicted RBP10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 INTS9Q9NV88 658 aaKnown RBP10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 TMEM248Q9NWD8 314 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 MOCS1Q9NZB8 636 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 SPG21Q9NZD8 308 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 GMIPQ9P107 970 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 ZC3H7BQ9UGR2 993 aaKnown RBP10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 SFMBT1Q9UHJ3 866 aa10.1□□□□□ -0.79
SMG6-IT1-201ENST00000624930 SSX2IPQ9Y2D8 614 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms