RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 SCAMP5Q8TAC9 235 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 TRPV6Q9H1D0 765 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 KCNK1O00180 336 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 B4GALT3O60512 393 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 ALDH1A2O94788 518 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 DDHD2O94830 711 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 LRIG2O94898 1065 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 DHRS4L1P0CG22 281 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 SERPINB6P35237 376 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 ETV4P43268 484 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 MBTPS1Q14703 1052 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 ZNF280BQ86YH2 543 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 SPATA2LQ8IUW3 424 aaPredicted RBP20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 CCNJLQ8IV13 435 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 HDAC11Q96DB2 347 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 MTBPQ96DY7 904 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 OXNAD1Q96HP4 312 aaPredicted RBP20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 OSBPL2Q9H1P3 480 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 HAUS2Q9NVX0 235 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 HTTP42858 3142 aa20.26■□□□□ 0.83
PCDHB11-202ENST00000624887 CEP350Q5VT06 3117 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 WDR27A2RRH5 827 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 MTSS1O43312 755 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 DNAJC8O75937 253 aaPredicted RBP20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 KRT38O76015 456 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 INHAP05111 366 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 PRMT2P55345 433 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 FAM189BP81408 668 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 GALNT2Q10471 571 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 GALNTL6Q49A17 601 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 CLLU1OSQ5K130 101 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 SLAIN1Q8ND83 568 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 LINC01599Q8WXQ3 324 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 TSEN34Q9BSV6 310 aaKnown RBP20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 C12orf65Q9H3J6 166 aaKnown RBP20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 KLHL8Q9P2G9 620 aaPredicted RBP20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 SNX10Q9Y5X0 201 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 TMEM189-UBE2V1I3L0A0 370 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 TNFRSF10BO14763 440 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 UGT1A9O60656 530 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 EPHB2P29323 1055 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 CYP2C18P33260 490 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 SLC5A3P53794 718 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 MGAT5Q09328 741 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 NOMO2Q5JPE7 1267 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 SUGP1Q8IWZ8 645 aaKnown RBP20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 ARNTL2Q8WYA1 636 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 RNF34Q969K3 372 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 TTC17Q96AE7 1141 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 RMDN2Q96LZ7 410 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 NAT9Q9BTE0 207 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 UGT1A7Q9HAW7 530 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 UGT1A10Q9HAW8 530 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 UGT1A8Q9HAW9 530 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 RXFP1Q9HBX9 757 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 ABCC13Q9NSE7 274 aa20.25■□□□□ 0.83
PCDHB11-202ENST00000624887 UBOX5O94941 541 aa20.24■□□□□ 0.83
PCDHB11-202ENST00000624887 MGAT1P26572 445 aa20.24■□□□□ 0.83
PCDHB11-202ENST00000624887 GRIK1P39086 918 aa20.24■□□□□ 0.83
PCDHB11-202ENST00000624887 GARSP41250 739 aaKnown RBP20.24■□□□□ 0.83
PCDHB11-202ENST00000624887 SERPINB9P50453 376 aa20.24■□□□□ 0.83
PCDHB11-202ENST00000624887 SESN2P58004 480 aaPredicted RBP20.24■□□□□ 0.83
PCDHB11-202ENST00000624887 FAM133BQ5BKY9 247 aaKnown RBP20.24■□□□□ 0.83
PCDHB11-202ENST00000624887 FBXW10Q5XX13 1052 aa20.24■□□□□ 0.83
PCDHB11-202ENST00000624887 CASC4Q6P4E1 433 aa20.24■□□□□ 0.83
PCDHB11-202ENST00000624887 CHSY1Q86X52 802 aa20.24■□□□□ 0.83
PCDHB11-202ENST00000624887 SLC43A3Q8NBI5 491 aa20.24■□□□□ 0.83
PCDHB11-202ENST00000624887 ARHGEF38Q9NXL2 777 aa20.24■□□□□ 0.83
PCDHB11-202ENST00000624887 GGT7Q9UJ14 662 aa20.24■□□□□ 0.83
PCDHB11-202ENST00000624887 IRAK2O43187 625 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 RFPL1O75677 317 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 PGAM1P18669 254 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 CCNFP41002 786 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 COLGALT2Q8IYK4 626 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 URGCPQ8TCY9 931 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 DEPDC1BQ8WUY9 529 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 FAM111AQ96PZ2 611 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 GORASP1Q9BQQ3 440 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 MKS1Q9NXB0 559 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 WDR91A4D1P6 747 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 COPEO14579 308 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 OAZ2O95190 189 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 CRADDP78560 199 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 BRMS1LQ5PSV4 323 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 OTOAQ7RTW8 1153 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 FITM2Q8N6M3 262 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 SRPK1Q96SB4 655 aaKnown RBP20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 VAT1Q99536 393 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 MANSC1Q9H8J5 431 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 HMX1Q9NP08 348 aaPredicted RBP20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 TRHDEQ9UKU6 1024 aa20.23■□□□□ 0.83
PCDHB11-202ENST00000624887 A0A1W2PQ45 241 aaPredicted RBP20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 A0A1W2PQY0 241 aa20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 HMX2A2RU54 273 aa20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 AP2A1O95782 977 aa20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 CNTFP26441 200 aa20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 GRK4P32298 578 aa20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 NIPAL4Q0D2K0 466 aa20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 CCDC15Q0P6D6 951 aa20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 SLC39A12Q504Y0 691 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms