RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, human

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-229	ENST00000621897	CHST12	Q9NRB3	414 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	ZNF580	Q9UK33	172 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	TRPC5	Q9UL62	973 aa	Predicted RBP	4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	LAMP3	Q9UQV4	416 aa		4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.96	□□□□□ -1.62
BRCA1-229	ENST00000621897	IGKV2D-30	A0A075B6S6	120 aa		4.95	□□□□□ -1.62
BRCA1-229	ENST00000621897	RHOD	O00212	210 aa		4.95	□□□□□ -1.62
BRCA1-229	ENST00000621897	SYF2	O95926	243 aa	Known RBP	4.95	□□□□□ -1.62
BRCA1-229	ENST00000621897	ALDOC	P09972	364 aa	Known RBP	4.95	□□□□□ -1.62
BRCA1-229	ENST00000621897	HOXB2	P14652	356 aa		4.95	□□□□□ -1.62
BRCA1-229	ENST00000621897	CCKAR	P32238	428 aa		4.95	□□□□□ -1.62
BRCA1-229	ENST00000621897	CIITA	P33076	1130 aa		4.95	□□□□□ -1.62
BRCA1-229	ENST00000621897	PPAT	Q06203	517 aa		4.95	□□□□□ -1.62
BRCA1-229	ENST00000621897	LRIG3	Q6UXM1	1119 aa		4.95	□□□□□ -1.62
BRCA1-229	ENST00000621897	SKAP1	Q86WV1	359 aa		4.95	□□□□□ -1.62
BRCA1-229	ENST00000621897	SYTL1	Q8IYJ3	562 aa		4.95	□□□□□ -1.62
BRCA1-229	ENST00000621897	STYX	Q8WUJ0	223 aa		4.95	□□□□□ -1.62
BRCA1-229	ENST00000621897	WDR83	Q9BRX9	315 aa	Known RBP	4.95	□□□□□ -1.62
BRCA1-229	ENST00000621897	SPAG4	Q9NPE6	437 aa		4.95	□□□□□ -1.62
BRCA1-229	ENST00000621897	ANAPC4	Q9UJX5	808 aa		4.95	□□□□□ -1.62
BRCA1-229	ENST00000621897	ZBTB1	Q9Y2K1	713 aa		4.95	□□□□□ -1.62
BRCA1-229	ENST00000621897	EVPL	Q92817	2033 aa		4.95	□□□□□ -1.62
BRCA1-229	ENST00000621897	LMTK3	Q96Q04	1460 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	DPPA5	A6NC42	116 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	CXorf65	A6NEN9	183 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	SMAD6	O43541	496 aa	Known RBP	4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	TNFRSF6B	O95407	300 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	ALDOA	P04075	364 aa	Known RBP	4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	HOXB6	P17509	224 aa	Known RBP	4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	CCKBR	P32239	447 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	PPM1A	P35813	382 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	TLE3	Q04726	772 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	GAD2	Q05329	585 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	PTGR1	Q14914	329 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	BTBD16	Q32M84	506 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	ISM2	Q6H9L7	571 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	MEPCE	Q7L2J0	689 aa	Known RBP	4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	RTL10	Q7L3V2	364 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	MDGA2	Q7Z553	956 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	FAM186B	Q8IYM0	893 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	OR1N1	Q8NGS0	311 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	ADAMTS15	Q8TE58	950 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	CLEC4C	Q8WTT0	213 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	ATP2A3	Q93084	1043 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	REXO5	Q96IC2	774 aa	Known RBP	4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	HTATIP2	Q9BUP3	242 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	CCDC134	Q9H6E4	229 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	SFXN1	Q9H9B4	322 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	TXNRD2	Q9NNW7	524 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	SLC12A4	Q9UP95	1085 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	SLC8A2	Q9UPR5	921 aa		4.94	□□□□□ -1.62
BRCA1-229	ENST00000621897	FAM90A8P	A6NJQ4	464 aa		4.93	□□□□□ -1.62
BRCA1-229	ENST00000621897	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
BRCA1-229	ENST00000621897	NFATC1	O95644	943 aa		4.93	□□□□□ -1.62
BRCA1-229	ENST00000621897	FAM90A13P	P0C7W8	464 aa		4.93	□□□□□ -1.62
BRCA1-229	ENST00000621897	FAM90A24P	P0C7X0	464 aa		4.93	□□□□□ -1.62
BRCA1-229	ENST00000621897	GRK5	P34947	590 aa		4.93	□□□□□ -1.62
BRCA1-229	ENST00000621897	POLD2	P49005	469 aa		4.93	□□□□□ -1.62
BRCA1-229	ENST00000621897	P2RX3	P56373	397 aa		4.93	□□□□□ -1.62
BRCA1-229	ENST00000621897	STARD3	Q14849	445 aa		4.93	□□□□□ -1.62
BRCA1-229	ENST00000621897	MAP9	Q49MG5	647 aa		4.93	□□□□□ -1.62
BRCA1-229	ENST00000621897	GPSM1	Q86YR5	675 aa		4.93	□□□□□ -1.62
BRCA1-229	ENST00000621897	NRSN1	Q8IZ57	195 aa		4.93	□□□□□ -1.62
BRCA1-229	ENST00000621897	WDR60	Q8WVS4	1066 aa		4.93	□□□□□ -1.62
BRCA1-229	ENST00000621897	IP6K1	Q92551	441 aa		4.93	□□□□□ -1.62
BRCA1-229	ENST00000621897	TMEM41A	Q96HV5	264 aa		4.93	□□□□□ -1.62
BRCA1-229	ENST00000621897	TP63	Q9H3D4	680 aa	Predicted RBP	4.93	□□□□□ -1.62
BRCA1-229	ENST00000621897	TRIP12	Q14669	1992 aa	Predicted RBP	4.93	□□□□□ -1.62
BRCA1-229	ENST00000621897	FAM90A18P	A6NE21	464 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	FAM90A16P	A6NEW6	464 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	C3orf70	A6NLC5	250 aa	Predicted RBP	4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	FAM90A9P	A6NNJ1	464 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	SLC38A8	A6NNN8	435 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	FAM90A5P	A8MXJ8	464 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897		H0YGN5	161 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	CYP3A4	P08684	503 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	FAM90A15P	P0C7V4	464 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	FAM90A14P	P0C7W9	464 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	GYS1	P13807	737 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	SERPINB3	P29508	390 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	TEC	P42680	631 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	CCSAP	Q6IQ19	270 aa	Predicted RBP	4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	HMBOX1	Q6NT76	420 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	CYB5R4	Q7L1T6	521 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	TRAPPC11	Q7Z392	1133 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	ADPRHL1	Q8NDY3	354 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	B4GALNT2	Q8NHY0	566 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	TMEM174	Q8WUU8	243 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	CLMN	Q96JQ2	1002 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	LYZL4	Q96KX0	146 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	ADAD1	Q96M93	576 aa	Known RBP	4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	ELAC2	Q9BQ52	826 aa	Known RBP	4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	MRPL44	Q9H9J2	332 aa	Known RBP	4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	FZD3	Q9NPG1	666 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	OBP2B	Q9NPH6	170 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	NLRC4	Q9NPP4	1024 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	FBXO4	Q9UKT5	387 aa		4.92	□□□□□ -1.62
BRCA1-229	ENST00000621897	LRP12	Q9Y561	859 aa		4.92	□□□□□ -1.62

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