RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 RNF19BQ6ZMZ0 732 aa10.21□□□□□ -0.77
VTA1-205ENST00000620996 SCD5Q86SK9 330 aa10.21□□□□□ -0.77
VTA1-205ENST00000620996 MARCH5Q9NX47 278 aa10.21□□□□□ -0.77
VTA1-205ENST00000620996 RABGEF1Q9UJ41 708 aa10.21□□□□□ -0.77
VTA1-205ENST00000620996 TET1Q8NFU7 2136 aa10.21□□□□□ -0.77
VTA1-205ENST00000620996 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.21□□□□□ -0.78
VTA1-205ENST00000620996 ENO4A6NNW6 628 aa10.21□□□□□ -0.78
VTA1-205ENST00000620996 DCLK1O15075 740 aa10.21□□□□□ -0.78
VTA1-205ENST00000620996 INPPL1O15357 1258 aa10.21□□□□□ -0.78
VTA1-205ENST00000620996 IRAK2O43187 625 aa10.21□□□□□ -0.78
VTA1-205ENST00000620996 OLIG2Q13516 323 aa10.21□□□□□ -0.78
VTA1-205ENST00000620996 KBTBD12Q3ZCT8 623 aa10.21□□□□□ -0.78
VTA1-205ENST00000620996 ZNF567Q8N184 647 aa10.21□□□□□ -0.78
VTA1-205ENST00000620996 LRRC43Q8N309 656 aa10.21□□□□□ -0.78
VTA1-205ENST00000620996 MPP5Q8N3R9 675 aa10.21□□□□□ -0.78
VTA1-205ENST00000620996 FCRL2Q96LA5 508 aaPredicted RBP10.21□□□□□ -0.78
VTA1-205ENST00000620996 OLFM3Q96PB7 478 aa10.21□□□□□ -0.78
VTA1-205ENST00000620996 TTPALQ9BTX7 342 aa10.21□□□□□ -0.78
VTA1-205ENST00000620996 ELAC1Q9H777 363 aaKnown RBP10.21□□□□□ -0.78
VTA1-205ENST00000620996 PNPLA8Q9NP80 782 aa10.21□□□□□ -0.78
VTA1-205ENST00000620996 MPP6Q9NZW5 540 aa10.21□□□□□ -0.78
VTA1-205ENST00000620996 TCRBV9S1A1TA0A576 114 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 C5orf60A6NFR6 353 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 TMEM189-UBE2V1I3L0A0 370 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 RPSAP08865 295 aaKnown RBP10.2□□□□□ -0.78
VTA1-205ENST00000620996 YWHAQP27348 245 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 CLNS1AP54105 237 aaKnown RBP10.2□□□□□ -0.78
VTA1-205ENST00000620996 AIF1P55008 147 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 FAAP100Q0VG06 881 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 RSPO2Q6UXX9 243 aaPredicted RBP10.2□□□□□ -0.78
VTA1-205ENST00000620996 TFAP2DQ7Z6R9 452 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 DNAAF3Q8N9W5 541 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 RTP4Q96DX8 246 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 CYTH2Q99418 400 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 APOL2Q9BQE5 337 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 FBXO44Q9H4M3 255 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 OSER1Q9NX31 292 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 CAPN7Q9Y6W3 813 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 MKI67P46013 3256 aaKnown RBP10.2□□□□□ -0.78
VTA1-205ENST00000620996 A0A1W2PPM1 405 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 KLHL33A6NCF5 533 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 OR6C75A6NL08 312 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 TTC36A6NLP5 189 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 TNFRSF10BO14763 440 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 CAPN15O75808 1086 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 JCHAINP01591 159 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 COL6A1P12109 1028 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 CA4P22748 312 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 TUBP50607 506 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 SCAPQ12770 1279 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 TAF10Q12962 218 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 IKBKEQ14164 716 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 PAFAH1B3Q15102 231 aaKnown RBP10.2□□□□□ -0.78
VTA1-205ENST00000620996 TAF12Q16514 161 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 RNF187Q5TA31 235 aaPredicted RBP10.2□□□□□ -0.78
VTA1-205ENST00000620996 VSTM1Q6UX27 236 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 CAND1Q86VP6 1230 aaKnown RBP10.2□□□□□ -0.78
VTA1-205ENST00000620996 BCL7CQ8WUZ0 217 aaPredicted RBP10.2□□□□□ -0.78
VTA1-205ENST00000620996 OGDHLQ9ULD0 1010 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 VANGL2Q9ULK5 521 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 TTC3P53804 2025 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 CCDC78A2IDD5 438 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 WDR27A2RRH5 827 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 MTMR11A4FU01 709 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 MX2P20592 715 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 DNAJB2P25686 324 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 GCAP28676 217 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 FDFT1P37268 417 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 TBX4P57082 545 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 PPP2R5DQ14738 602 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 BNIPLQ7Z465 357 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 MON1AQ86VX9 555 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 ATPAF2Q8N5M1 289 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 PGAP3Q96FM1 320 aaPredicted RBP10.2□□□□□ -0.78
VTA1-205ENST00000620996 CHMP6Q96FZ7 201 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 FUBP3Q96I24 572 aaKnown RBP eCLIP10.2□□□□□ -0.78
VTA1-205ENST00000620996 SERPINB11Q96P15 392 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 ACSS3Q9H6R3 686 aa10.2□□□□□ -0.78
VTA1-205ENST00000620996 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.2□□□□□ -0.78
VTA1-205ENST00000620996 SLC12A8A0AV02 714 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 H7C4K7 107 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 OPHN1O60890 802 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 FAM155BO75949 473 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 APOEP02649 317 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 KRT4P19013 534 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 MGAT1P26572 445 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 OR1D2P34982 312 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 ELAVL2Q12926 359 aaKnown RBP10.19□□□□□ -0.78
VTA1-205ENST00000620996 PRKD1Q15139 912 aaPredicted RBP10.19□□□□□ -0.78
VTA1-205ENST00000620996 PSMD5Q16401 504 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 CES3Q6UWW8 571 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 C4orf22Q6V702 233 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 PRPF39Q86UA1 669 aaKnown RBP10.19□□□□□ -0.78
VTA1-205ENST00000620996 RIBC1Q8N443 379 aaPredicted RBP10.19□□□□□ -0.78
VTA1-205ENST00000620996 TBC1D31Q96DN5 1066 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 CRISPLD1Q9H336 500 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 SMOC2Q9H3U7 446 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 LGALS13Q9UHV8 139 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 TEX264Q9Y6I9 313 aa10.19□□□□□ -0.78
VTA1-205ENST00000620996 WDR91A4D1P6 747 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms